Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00652 ATGCCGGAAGAGGATTTGGTTGACATCAAGTTTAGGTTGTACGATGGCTCCGACATCGGACCCTTTAGGTATTCATCCGCCGCCACCGTCGATATGCTTAAGCAGAGGATTGTCTCCGATTGGCCCAGAGGTAAAACGGTTGTGCCAAAGTCAGCTAATGAAGTGAAATTGATTAATTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAATGTAAAGTACCTTTTGGTGAAATTGCTGGGAGTGTTATAATAATGCATGTTGTTGTACAGCCATCTCTAGCTAAAACTAAAGCTGCTTACCATTACTGCATTGATTCACATGGGGAAGGTAACTGCACGAACAATCCCGTTTGA 360 0.4278 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPRGKTVVPKSANEVKLINSGKILENNKTVGQCKVPFGEIAGSVIIMHVVVQPSLAKTKAAYHYCIDSHGEGNCTNNPV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00652 119 PIRSF MUB 1 116 IPR017000 -
Viun3g00652 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 100 IPR040015 -
Viun3g00652 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 101 IPR039540 -
Viun3g00652 119 CDD Ubl_MUBs_plant 6 93 - -
Viun3g00652 119 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Viun3g00652 119 Gene3D - 1 100 - -
Viun3g00652 119 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00652 Viun-Chr3 4005247 4014389 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00652 - - vra:106768304 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00652 3 4005247 4014389 Viun3g00652 3 4005247 4014389 ECH