Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00649 ATGGCAGTACTACGTTCGACGGCAACCTCATCCTTGTTCATCCTCGGAGTCTTCGCTGCTTTTGTTGCAGGTTGTGCAATGGGAGCGGTGATGAATGAGAAGTGCAGCAAGAGTAGCATGGAAGTAAGCCAAAGTCCGACGGTTCCACTTCCGAGTGGAATTCCACAATATACGGTTGAGATGGCGAACACGTGCAGCAGAAGTAACTGCAGCGTTTCTCACATTCATCTAAAGTGTGGCATGTTCACTTCTGCAACTCTCATAAACCCTAAAATCTTCAAACGCCTTCGCTACAATGACTGTCTCGTTAACGATGGCAATCCCTTAAGCAGCGGTGTCATTCTTTCCTTCAAATATGCTTCTTCCTTTCCTTATCCTCTCTCTGTTTCCTATCTGCGTTGTGATTGA 408 0.4632 MAVLRSTATSSLFILGVFAAFVAGCAMGAVMNEKCSKSSMEVSQSPTVPLPSGIPQYTVEMANTCSRSNCSVSHIHLKCGMFTSATLINPKIFKRLRYNDCLVNDGNPLSSGVILSFKYASSFPYPLSVSYLRCD 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00649 135 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Viun3g00649 135 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 22 130 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00649 Viun-Chr3 3997636 3998127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00649 35 129 Glycosyltransferase AT4G32110 34.375 4.65e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00649 - - pvu:PHAVU_002G284300g 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00649 3 3997636 3998127 Viun3g00649 3 3997636 3998127 ECH