Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00647 ATGGATGTTTGCGTGAAGGAGGAAGTCTCGGAGACTCCAACTGTAACTCAGAGGAAACCGCGAACCGGTGCTGTTTCAGTGCCTCCTCCGGACTCGGTCATCGAACTCAGCAGTAGCGATAGCGATTCCGAAAGCGACATTGATTTGGACGATGTAGTCGCCAGTGCACTGCAGGACGGAGGAAGTCCTTCTAAGAAGCCAAAGACTGACTCCGGAGCGGTTTTGCCGGTTGGATTCCTCAGCCCTCTCCCTCCGGCACCAGCCTCTCCACCGGCATCTCTACTGGCATTGCCGGCGCCGGAGTGGGCTTCTATTTCGGCGTCGCTGTCCAAGGACTATTCGGGACCGGGAGTGAATAGCTGCAAGCAGTTCTGGAAGGCTGGGGATTACGATGGAGCTGTCTGCGGTGGTTCTGGATCTTCAACAGTTGGTATGGATCATGTCAGAGTTCACCCCAAGTTTTTACACTCTAATGCCACAAGCCACAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGATGAGGTTTGTAATGGGGCGACATATGTTAATGTAGATATGCTTATAAATAAGAAAGATGGCTCCAGGATGTTGCTGATCGAAGATAATGGTGGTGGGATGGACCCTGATAAAATGCGTCAATGTATGTCACTGGGGTATTCTGTGAAAAGCAAAATAGCGAACACAATTGGACAATATGGAAATGGCTTTAAAACAAGTACCATGAGGCTAGGGGCTGATGTAATTGTTTTCTCCCGTTTTCCAGGGAAAGATGGGACAAGCTCTACTCAAAGCATAGGTTTGCTGTCTTACACATTTTTGAGGAGTACGGGAAAGGAAGACATTGTAGTACCCATGTTGGACTATGAAAGAAGAGGACGGCAATGGAATAAGATAATACGAACTACTCTGGATGATTGGAATAAAAATGTTGAAACAATGGTACAGTGGTCACCATTTTCTGATGAGGCTGATCTTCTTCGTCAGTTCAACTTGGTGAAAGATCATGGTACACGAGTAATTATATACAATCTTTGGGAAGATGACCAAGGTCAACTGGAACTTGATTTCGATGCTGATCCACATGATATCCAAATTAGAGGTGTTAATCGAGATGAGAAAAACATACAGATGGCTAAAGAGTTTCCCAATTCTCGACATTTTTTGACCTATCGGCATTCACTAAGGAGTTATGCTTCAATTTTATATCTGAGGCTTCCTTCTGGCTTCCGAATTATTCTTCGCGGGGAAGATATTTTGCATCACAACATAGTGAATGATATGATGATGTCTCAGGAGGTGACCTACAAGCCTCAAGCTGGAGTTGATGGGCTTCTTCCAAAGGACTCATATATGGTTGCTGTTGTTACTATTGGATTTGTCAAGGATGCAGTTCACCATGTTGATGTCTCGGGTTTTAATGTCTATCATAAGAATCGTCTCATTAAGCCTTTCTGGAGGATCTGGAATCCAGCTGGAAGTGGAGGACGTGGGGTCATTGGTGTCCTGGAAGCCAATTTTGTGGAACCCGCTCATGATAAACAAGGCTTTGAGCGCACATTAGTTTTATCAAGACTGGAGTCTAAATTGATACAAATGCAGAAAAAATACTGGGGCACTAACTGCCACAAAATTGGTTATGCTTCCAATCGAAATAAAATACAAATAAGAGATTCTGGTGATAAAGACACAACTCCTGAATATGTTCCAGAACCATCACAATCAAAAAGGAAATATTCTACCATGGATGGCAAGGTAACGCCATCGACATCAGACAAATTGCATTCACAACCAAATCAGAAACGGATGCAAAAAGAAACAGAAAGAGAGAGTGCATTTAATAATAAACGGATGCAAAAACAAACAGAAAAAGATAGTGCATTTATTAATGGCCGATCTCCTGTTTCTCCTCCTAAACATATAATACAAAGTTCATCCGAGGAATCATCCTCTGATGATGATCTCAGTGAGGATCTCTTGCCTAAAAGAACAAAGAAGACATCTGCCGCTGAGAAGTCATTTGAAAATGAGAATGGAGGCACTACATCAAATAGAAAAGCCTCACAGTACACACGGGCATCCGCATCCAAGATAAAGGGAAAAGATGTAAATAATGGCGAGCAACCACTATCTGACAATGGTTTACTGACACTTGAGCAATTGAAAAAAGAGAACCGTGAGTTGAAGGAAAGATTACAGAGGAAGGAAGAGGAAATTTTAGAAGTGTCTCAAGCTTTGCTGCATGACCAAGACAAGTGTAAATCTCTCGAAACTCAGCTAAACGAGTCAGAAAAAAAGATTGAAGAGTTGAACCGTGATCAAGAAACTCTCATTGATGTATTCTCTGAAGAGAGGGATAGACGTGATGCTGAAGAGAAAAATCTAAGAAAGAAGCTTCAGGAGGCATCAAATACTATCCAAGAGCTGCTTGACAAGATACGGGTACTTGAAAAGAAGTCTACAAGTGGTAAACTAGAACGATAA 2496 0.4275 MDVCVKEEVSETPTVTQRKPRTGAVSVPPPDSVIELSSSDSDSESDIDLDDVVASALQDGGSPSKKPKTDSGAVLPVGFLSPLPPAPASPPASLLALPAPEWASISASLSKDYSGPGVNSCKQFWKAGDYDGAVCGGSGSSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMLINKKDGSRMLLIEDNGGGMDPDKMRQCMSLGYSVKSKIANTIGQYGNGFKTSTMRLGADVIVFSRFPGKDGTSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGRQWNKIIRTTLDDWNKNVETMVQWSPFSDEADLLRQFNLVKDHGTRVIIYNLWEDDQGQLELDFDADPHDIQIRGVNRDEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRLPSGFRIILRGEDILHHNIVNDMMMSQEVTYKPQAGVDGLLPKDSYMVAVVTIGFVKDAVHHVDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWGTNCHKIGYASNRNKIQIRDSGDKDTTPEYVPEPSQSKRKYSTMDGKVTPSTSDKLHSQPNQKRMQKETERESAFNNKRMQKQTEKDSAFINGRSPVSPPKHIIQSSSEESSSDDDLSEDLLPKRTKKTSAAEKSFENENGGTTSNRKASQYTRASASKIKGKDVNNGEQPLSDNGLLTLEQLKKENRELKERLQRKEEEILEVSQALLHDQDKCKSLETQLNESEKKIEELNRDQETLIDVFSEERDRRDAEEKNLRKKLQEASNTIQELLDKIRVLEKKSTSGKLER 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00647 831 Pfam Morc6 ribosomal protein S5 domain 2-like 397 542 IPR041006 -
Viun3g00647 831 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 167 358 IPR036890 -
Viun3g00647 831 MobiDBLite consensus disorder prediction 602 627 - -
Viun3g00647 831 Gene3D - 152 354 IPR036890 -
Viun3g00647 831 MobiDBLite consensus disorder prediction 572 601 - -
Viun3g00647 831 MobiDBLite consensus disorder prediction 557 715 - -
Viun3g00647 831 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 76 804 IPR045261 GO:0016887
Viun3g00647 831 MobiDBLite consensus disorder prediction 1 46 - -
Viun3g00647 831 FunFam MORC family CW-type zinc finger protein 4 151 355 - -
Viun3g00647 831 MobiDBLite consensus disorder prediction 659 676 - -
Viun3g00647 831 Coils Coil 715 784 - -
Viun3g00647 831 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 167 270 - -
Viun3g00647 831 MobiDBLite consensus disorder prediction 677 699 - -
Viun3g00647 831 Coils Coil 792 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00647 Viun-Chr3 3976967 3990797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00647 - - gmx:100786679 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00647 3 3976967 3990797 Viun3g00647 3 3976967 3990797 ECH