Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00644 ATGCCCGTGCGCCGTCTCAGACTCGATTCCGACACCGACGAAGAAGAACAACACCCACTCCAACCCCAATCCCAACCACGGCCACAGCCACAGCCACATTTTCCGGCGGTTCCCGTTGAAATCTCCGACGATGAAGACTTCATCGACGTCGCCGAAAGCCTCTCCCCGCCCTCCCCTTCCTGTCCAGTCTCCGACTTCCTCCGCCGCCTCGGTCTGTCTCTCAAGAGAGACTGGCTCGCCTCCTGTCTCCGCCAACTCCAAGCCTCTGTTGCGTCCTTCGAACACCTCGACGTTGCCGCCAAAGCCAAACGTTGTTTCGAGCAGTTCCTCTTCGCCGACATGAATTCATGTGGCGCCGGCGTTCTCCCTCCCAACGTCGATTCCATGCACCTTCGCGTTCTCCCTGGTCCCTACGTTTTGCAGGTTGATGAAATAATTAATATCACTTGTAACCTACGAGGAAGATACGAACAAGCACCTCCTGGACCTAAGAGGTGCCTCAAGTTGTCAATGACTGATGGTGTTCAGAGAGTATTTGGAATGGAGTATAGGCCTATCAAAGCGCTTGAAGTTTGTGCCTCTTCTGGTTTAAAGGTTGCTATCTCTAATGTACATGTGCGTCGTGGACTTCTAATGTTGGTCCCTGAAACCATTGAAATTTTGGGGGGATTGGTTGAGGAGCTGGATGCTGCTCGAAAACGACTGGTTGAAGAAATAAACAAGCCACCTAGGGGGAAAAGAAACAAAAATGGAGAGCTCCCTCCTTTAGCAACTAGAGCAACACTTGCTGCATGGCCTCCAGGTGGGGTTGATAATCGTGCGTGCAATGGCTCCACGCTGCACAGTAATGTTTCTTTCCAAGAAAACAACCAAGGTGCTGGCCAGAGCATACCTAGCCCTGTTAACAACTTACCAACTGAAGATACTTTGTCCATGGGTGCACGCAGTGCTGCTTCTAATTCAATACCCTGCATGTCATCACATTCCAACGCCATGAATGTGGATACGCCTAGGAATACCGATCCTGTATCCCATGCTAGTCCTATGTCTAACCAACTCTCTTCTGTAATCTCAAGGGCCAAGGATATGCACATAGATGCTTCTAATGCAAGGGAATGTTCTATTGACCATCAGTATTCTAACATGGATTCAAATGTTGCAGCGGCACATATGGACTCAGTTAATATAACACGAGAAAATTCTGTAGGTATTGAGTGCTCTCCTGTTGTTGTCAATATTGACACAGATACAGATAGAACTCCTGTTGCTACAGATACTACTCATCTGCAAAGAACCTCATCCACTGTTTTAGACACTAGCGATGTCCAGATGGTTGATGCCATTGACCATCCACTCATACTGTCTAGAGACCAAGAGGTTCCTTTCACATACATAGCTAGTTTGTCAGCTAAGTGGGCTAAAATCAAGGAGGAAGCTCCTTCCGTTCAGGGGAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTCCAGTTTAAGAAAAGGACAACATATGAACTTCAGGCATATGTAGACGATGGTAGCCTTATTTCTGAAATCCTTGTCGATCATAATGTTGTAGAGAAAGGAATTGGTTATTCTCCTGAGGAGGTAACTGCGGCTCTTTCTTCTCCTGACACAAAAATCGTACACCAAATGAAGGATACAATGCGTAAATTTCAAGCCTTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAATTCAATAAAAAATCTCCCCTTCCACTTGCTCTAGAGATGAGTCAAGGTTGTCCGCAGTCTGATGCATGGTTACTTCTGAGAAGGCTGAAGTCTCTTCAACCTGCACTAGTTCAAAACCCTACGGATCCGATTGAGTTATCCCCGTAA 1866 0.4668 MPVRRLRLDSDTDEEEQHPLQPQSQPRPQPQPHFPAVPVEISDDEDFIDVAESLSPPSPSCPVSDFLRRLGLSLKRDWLASCLRQLQASVASFEHLDVAAKAKRCFEQFLFADMNSCGAGVLPPNVDSMHLRVLPGPYVLQVDEIINITCNLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLVEELDAARKRLVEEINKPPRGKRNKNGELPPLATRATLAAWPPGGVDNRACNGSTLHSNVSFQENNQGAGQSIPSPVNNLPTEDTLSMGARSAASNSIPCMSSHSNAMNVDTPRNTDPVSHASPMSNQLSSVISRAKDMHIDASNARECSIDHQYSNMDSNVAAAHMDSVNITRENSVGIECSPVVVNIDTDTDRTPVATDTTHLQRTSSTVLDTSDVQMVDAIDHPLILSRDQEVPFTYIASLSAKWAKIKEEAPSVQGKIKCFLTGVKGFQFKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPEEVTAALSSPDTKIVHQMKDTMRKFQAFLANFEGIILVEFNKKSPLPLALEMSQGCPQSDAWLLLRRLKSLQPALVQNPTDPIELSP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00644 621 FunFam RecQ-mediated instability protein (DUF1767) 113 239 - -
Viun3g00644 621 Pfam RecQ mediated genome instability protein 69 234 IPR013894 -
Viun3g00644 621 MobiDBLite consensus disorder prediction 1 20 - -
Viun3g00644 621 SMART DUF1767_2 64 157 IPR033472 -
Viun3g00644 621 MobiDBLite consensus disorder prediction 1 38 - -
Viun3g00644 621 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 461 602 IPR032199 GO:0000166
Viun3g00644 621 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 60 604 - -
Viun3g00644 621 Gene3D - 113 239 IPR042470 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00644 K10990 - vvi:100244067 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00644 3 3949085 3953043 Viun3g00644 3 3949085 3953043 ECH