Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00636 ATGGGCGAGGAAGAGAAAAAACCAGAGGAAACCAAAGTGGAGGAGAAAAAAGCAGAGGAACCCAAGGAGGAGAAGAAACCCGAGCAAGACAAAAAAGCAGAGGAGTCAAAAGATGAGAAGGAATCCAAGGAGGAGGAATCTCCGGCGCCGCCGCCAGAAATCGTGCTTAGAGTCTTCATGCATTGCGAGGGTTGTGCTCGCAAGGTTCGCCGCTCCCTCAAAGGATTCCCAGGGGTGGAAGATATCCTCACGGATTGCAAGTCTCACAAGGTGGTGGTGAAAGGCGAAAAGGCGGATCCGCTGAAGGTTCTAGAAAGAGTACAGAGGAAGAGCCACAGAAAGGTGGAGCTCCTCTCTCCGATCCCAAAACCGCCGGCAGAAGAAGAGAAAAAGCCCGAAGAGGAAGAGAAGCCCAAACCAGAGGAGAAGAAAGAAGAGCCTCAGGTTATTACGGTGGTTCTGAAAGTCCACATGCATTGTGAAGCTTGCTCCCAGGAGATCAAGAGACGCATAGAGAGAATGAAAGGGGTGGAGTCAGTGGAAACAGATCTGAAGAGTTCAGAGGTGAGCGTGAAGGGGGTGTTGGAGGCAGAGAAGCTGGTGGAGCAGGTGTCGAAGAGGACGGGGAAGCATGCAGTGATAGTGAAAGTGGAGAGAGAGAAGAAGGAGGAGGAAGCAAAAGAAGAGGGTAAAGGAGAGGAAGGTGAGAAGAAGGAGAAGGAAAATGGTGAAGGAGAAGAGAAGAAGGAGAAGAAAGAAGGAGAGGGTGAAGGTGAAGGTGAAGGGAAAGGGAAAGGAGAAGAAGGAGGCACAGAAGAAAACACAGTGGTGGAGCTGAAAAAGAGTGAGTATTATTACAACCCTCCAAGGTATGGCATGGAGTTGTATGCATACCCTGGACCAGCTTACCCTCCCCAGATCTTCAGCGATGAGAATCCCAATGCCTGTTCTGTGATGTAA 960 0.5021 MGEEEKKPEETKVEEKKAEEPKEEKKPEQDKKAEESKDEKESKEEESPAPPPEIVLRVFMHCEGCARKVRRSLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERVQRKSHRKVELLSPIPKPPAEEEKKPEEEEKPKPEEKKEEPQVITVVLKVHMHCEACSQEIKRRIERMKGVESVETDLKSSEVSVKGVLEAEKLVEQVSKRTGKHAVIVKVEREKKEEEAKEEGKGEEGEKKEKENGEGEEKKEKKEGEGEGEGEGKGKGEEGGTEENTVVELKKSEYYYNPPRYGMELYAYPGPAYPPQIFSDENPNACSVM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00636 319 MobiDBLite consensus disorder prediction 108 148 - -
Viun3g00636 319 Gene3D - 146 215 - -
Viun3g00636 319 CDD HMA 153 212 IPR006121 GO:0046872
Viun3g00636 319 MobiDBLite consensus disorder prediction 1 54 - -
Viun3g00636 319 Gene3D - 51 123 - -
Viun3g00636 319 Pfam Heavy-metal-associated domain 55 110 IPR006121 GO:0046872
Viun3g00636 319 Pfam Heavy-metal-associated domain 154 211 IPR006121 GO:0046872
Viun3g00636 319 ProSiteProfiles Heavy-metal-associated domain profile. 51 115 IPR006121 GO:0046872
Viun3g00636 319 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 34 319 IPR044577 GO:0046872
Viun3g00636 319 SUPERFAMILY HMA, heavy metal-associated domain 56 110 IPR036163 GO:0046872
Viun3g00636 319 ProSiteProfiles Heavy-metal-associated domain profile. 149 213 IPR006121 GO:0046872
Viun3g00636 319 MobiDBLite consensus disorder prediction 219 279 - -
Viun3g00636 319 MobiDBLite consensus disorder prediction 1 50 - -
Viun3g00636 319 SUPERFAMILY HMA, heavy metal-associated domain 147 216 IPR036163 GO:0046872
Viun3g00636 319 Coils Coil 26 46 - -
Viun3g00636 319 CDD HMA 60 116 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00636 Viun-Chr3 3876803 3878609 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00636 - - gmx:100796289 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00636 3 3876803 3878609 Viun3g00636 3 3876803 3878609 ECH