Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun3g00621 | ATGTCAATTCAAGGTGTTTCTTCTCGAAGGCTCGCTTCGTTGACGAACAGCCCCTCGCAGAACAAGAAGAAAGCCTCTGAGTATTCGTCGCTTGACCTTACTCCTCGTAAAACGTTCCCGTCACCGCGCACCGTGGGAGAGCGAACTGTGAAGTCATTGCGGCTTTCAAAGGCATTGACAGTTCCTGAAACAACCACCGTCTATGAAGCTTGTCGTAGGATGGCTGCTCGCAAAGTAGATGCTCTACTGCTAACAGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAACAACAAGAGTTATTGCTCGTGAGGTTAATCTCGAAGAAACAACCGTTTCCAAGGTTATGACAAGGAATCCAGTATTTGTCCTTTCTGACACTCTTGCTGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAGGTTCAGACATTTACCTGTGGTGGACAACGGAGAAGTTGTTGCCATACTTGACATAGCGAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGGCAGCAGAGAAAGGAAGGGCAATTGCGGCTGCTGTTGAAGGCACCAATTCGACGTTCTTTGAGTCACTTCGCGAGCAGATATTCAAGCCTTCTTTGTCTACAATAATTCCTGAGAATTCAAAGGTTGTTACAGTTTCACCAACAGACTCAGTTTTGGCGGCAACAAAGAAGATGCTTGAACTTCGTGCTAGTTGTGCGGTTGTGACTGTTAATGACAAACCTTGTGGTATCCTTACTTCAAAGGATATCTTGATGCGGGTGATAGCACAAAGTCTTCCTCCAGAATTTACTCTTGTTGAGAAGGCCATGACTCCAAATCCAGAATGTGCAATAATTGATACACCAATAGTCGATGCACTTCACACTATGCATGATGGGAAATTTTTGCATCTTCCCATTGTTGATAGAGATGGTACTGTTGTTGCTACGGTTGATGTAATTCATATAACTCACGCGGCTGTAGCAACAGCTAGTCAGGTCGGAAACAGTGCTGGTTTTAATAATGAAGCAGCCAACACCATGATACAAAAATTTTGGGATTCGGCCATGGCCTTAGTTCCAAATGGGGAGGACGACGATTCCCAAAGCGAAGCTTCCTTGAAAATGGTTTCTGAGGGAGGAGAAATAGGGAGATCCCTTTCTTATATTGGGTCAAGCATGACGAATGCATTTTCCTTCAAATTACAAGACAGGAAGGGTAGATTGCATAGATTCACATGCGATACTCGGAGCATGACAGATGTAATAACTTGCATCATTCATAGAATCGGTGATGACATTGACCCCACGAACCTGCCCCAAATTTTGTACGAAGATGAAGAAAATGATAAAATTGTACTGGCTTCGGACAGTGATCTTGCCGCAGCTGTAGACCACGCAAAAGCGGCTGGTTTGAAGGGATTGAGATTGCATTTAGACTACTCAGGAACACGGGATTATGGAAATGATTCAAGTTCAATGAGTTGGAAATATGGTAATTCAGAATCATGGGCAACAGCATACAGCACTTTTGCTGCTGGAGCTGCAATTGTTGCTGCCTTAGGCCTAATGGCATTTGTGAGGCGAAGTTAA | 1596 | 0.4436 | MSIQGVSSRRLASLTNSPSQNKKKASEYSSLDLTPRKTFPSPRTVGERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDITTRVIAREVNLEETTVSKVMTRNPVFVLSDTLAVEALQKMVQGRFRHLPVVDNGEVVAILDIAKCLYDAIARMERAAEKGRAIAAAVEGTNSTFFESLREQIFKPSLSTIIPENSKVVTVSPTDSVLAATKKMLELRASCAVVTVNDKPCGILTSKDILMRVIAQSLPPEFTLVEKAMTPNPECAIIDTPIVDALHTMHDGKFLHLPIVDRDGTVVATVDVIHITHAAVATASQVGNSAGFNNEAANTMIQKFWDSAMALVPNGEDDDSQSEASLKMVSEGGEIGRSLSYIGSSMTNAFSFKLQDRKGRLHRFTCDTRSMTDVITCIIHRIGDDIDPTNLPQILYEDEENDKIVLASDSDLAAAVDHAKAAGLKGLRLHLDYSGTRDYGNDSSSMSWKYGNSESWATAYSTFAAGAAIVAALGLMAFVRRS | 531 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun3g00621 | 531 | ProSiteProfiles | CBS domain profile. | 120 | 178 | IPR000644 | - | |
| Viun3g00621 | 531 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 35 | 468 | - | - | |
| Viun3g00621 | 531 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Viun3g00621 | 531 | ProSiteProfiles | CBS domain profile. | 210 | 270 | IPR000644 | - | |
| Viun3g00621 | 531 | SUPERFAMILY | CBS-domain pair | 215 | 327 | IPR046342 | - | |
| Viun3g00621 | 531 | SMART | cbs_1 | 216 | 263 | IPR000644 | - | |
| Viun3g00621 | 531 | SMART | cbs_1 | 57 | 105 | IPR000644 | - | |
| Viun3g00621 | 531 | SMART | cbs_1 | 281 | 329 | IPR000644 | - | |
| Viun3g00621 | 531 | SMART | cbs_1 | 123 | 167 | IPR000644 | - | |
| Viun3g00621 | 531 | ProSiteProfiles | CBS domain profile. | 278 | 335 | IPR000644 | - | |
| Viun3g00621 | 531 | Gene3D | - | 204 | 340 | IPR046342 | - | |
| Viun3g00621 | 531 | Gene3D | - | 40 | 185 | IPR046342 | - | |
| Viun3g00621 | 531 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Viun3g00621 | 531 | SUPERFAMILY | CAD & PB1 domains | 392 | 487 | - | - | |
| Viun3g00621 | 531 | Pfam | PB1 domain | 399 | 481 | IPR000270 | GO:0005515 | |
| Viun3g00621 | 531 | ProSiteProfiles | CBS domain profile. | 54 | 113 | IPR000644 | - | |
| Viun3g00621 | 531 | SMART | PB1_new | 398 | 483 | IPR000270 | GO:0005515 | |
| Viun3g00621 | 531 | SUPERFAMILY | CBS-domain pair | 47 | 164 | IPR046342 | - | |
| Viun3g00621 | 531 | Pfam | CBS domain | 214 | 260 | IPR000644 | - | |
| Viun3g00621 | 531 | Pfam | CBS domain | 274 | 325 | IPR000644 | - | |
| Viun3g00621 | 531 | Pfam | CBS domain | 116 | 160 | IPR000644 | - | |
| Viun3g00621 | 531 | Pfam | CBS domain | 56 | 101 | IPR000644 | - | |
| Viun3g00621 | 531 | CDD | CBS_pair_MUG70_1 | 55 | 171 | - | - | |
| Viun3g00621 | 531 | CDD | CBS_pair_MUG70_2 | 214 | 330 | - | - | |
| Viun3g00621 | 531 | ProSiteProfiles | PB1 domain profile. | 396 | 483 | IPR000270 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun3g00621 | Viun-Chr3 | 3812150 | 3819220 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun3g00621 | - | - | gmx:100783514 | 848.195 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Viun3g00621 | 3 | 3812150 | 3819220 | Viun3g00621 | 3 | 3812150 | 3819220 | ECH |