Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00604 ATGTTCAGATGGAGGAGTGAGAAACACAAAGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGAATCTCTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCAGCAATTCGTGGTGGAGTTTGTAGATGGGAGAATCCTGTCTATGAAACAATCAAGCTTTTTCAGGAGCCTAAGACTGGGAAATTCAGTGAGAGAGTATATTATTTCGTGGTTTCAACGGGGTTATCAAAAGTTAGCTCCTTTGGTGAAGTCTCTGTAGACTTTTCTGAGTACGCTGAGGCTACGAAACCCTCCACTGTCTCTCTTCCCATCAAGAATTCTCATTGTGAAGCAGTCTTGCATGTGTCAATCCAGAGGCTGCAAGAAAACAATGATAAAAGACCGCAAGAGGATTGTGAAGGTACCGAACTAAAACCCAATGATAGAAGTTTGAGGACCTACTTGAGCAATGGAGAGATAGATGCAAGCTTGAAAAGTGATTCTTCTGAAGATGTGTCTGCCAAAGAAAATGGCAATGGAGCTGAATTGAGTGCTGATTGTAGGACATCCAGTGGATCTGACATTACAACGTTAAGTTCTGATGGAAGCTCTGGACTCGACACACCCAGAGAAGTAGGAGTGAGAAATGGTGGTGGCATCCACCCCAACAACAACGGTTTTGTTTCAGATGTTAGCCACACATCTGATTCCCAGAAACCTGCAATAAATGATATTCATCAGAGATCACACTGGGACTGGTCTGGTGGTTCAGAACACAGTTTGAGTACAGATGGGTCGACAAATAGTTCCCATCAAACATCTGATGTGGAAATTGGAAGACTCAAGGTTGAACTTGCTGCATTGACCAGGCAAGTGGATGTGTCAGACTTGGAACTGCAGACACTAAGGAAGCAAATTGTGAAGGAAAGCAAAAGAACACAGGAGCTCTCAAAGGAAATCATTTGCGTGAAAGAGGAAAGAGATGCACTCAAGGTTGAATGTGACAATCTCAGATCTTTTCATAAACGAATGGAGGATGCCAAATTGAGTAATAGGAAACCATTGGATAGTGGGGATCTTTGTACTCTTGTTGAAGAAATTAAACAAGAATTGAAGTATGAGAAGGAGCTGAACGCAAATCTTCAATTACAGTTAAAGAAGACACAAGAGTCGAACGCTGATCTAGTTCTTGCTGTGCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGGGAAATGTGTAGTCTTTCCAATAAGAACGAAGAGGGTAAAATCTCCCGTGAGTCCGAGGGAAAGCTCTCTAATTCTGAAACGGATGATGAACAGAAAGAGTTGGAAGAGCTGGTTAAGGAGCACAGCAATGCTCAGGAGACTCACCTACTTGAGCAAAAGATTATGGATCTCTATGGGGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGATTATGAGATATTGAAACAGGAAAACCATGATATTGCATATAAGCTGGAACAGAGTGAACTTCAAGAACAATTAAAATTGCAGTATGAATGCTGTTCTCCTCCTGCTGTTGATGAAATCGATGCCCATATTCAGAATCTGGAAAACCAACTCAAGCAACAGTCAGAAGAACTCTCAAATTCTCTGGCTACGGTCAAGGATCTTGGAAACCAAATCAGCAGATTAGAGGAAGAATTGGAGAAACAAGCCCAAGGATTTGAAGCTGATCTAGATGCCGTGACACGTGCCAAAGTTGAGCAGGAGCAAAGAGCCATTCAAGCAGAAGAAGCTTTGCGAAGCACCAGACTTAAAAATGCTAACACTGCTGAGAGGCTTCAGGAAGAGTTTAGAAGGCTCTCAATGCAAATGGCGTCTACATTTGATGCCAACGAGAAAGCTGCCATGAGGGCATTGACAGAAGCAAGTGAACTTCGTGCACAGAAAAGACTAGTGGAAGCAATGCTGCACAAAGTCAGCGACGAGCTTCAGTCAGCCAAAGCTGATTATGAGGTAAAACTGGATGAACTTTCCGACAAAATAGACATGATGGCAGCTCAGAAACAACAGATGTTGTTGGAAATTGACGACAAGACCAAGCAGCTCGAAAATCAGAAGAAGCGTGAGGAACAAGTTAGTAGGGGTTTCTTTGAAGAGATCCAGATGCTAAAAGCTGAAAATGAAAGGCTTAAAGTGGAGATTTCATGCCTCTCTGAGAAAGTAGAACAAAAAGATATCTTAAGAAATGACTTGGAACTTGTGAAGAAATCGCTTGAGGAGTCTGAGGCTCGGTTGAATAGTAGAACAGTGGAAAGAAATGAGCTGGTGAGTGAAATTGCTCTGTTGAAAAAGGAAGCAGAAAGGTCATTTGATGAGCTAAACGGGATGAAGCATCTCAATGATGAAAAAGAGATTGAAACTAGAGTTTTGCAGTCAGAGTTAGAAGAACTCAGAGCTCAATACAGTGACTTGAAAAGAGCCTGTTTTGAGGATGAAGCTGAGAAAGAAAATCTAAGAAAACATGTTTTCCAGCTAAAGGGTGAACTTAAGAAGAAGGACGACGCATTAACCAACATAGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAACTTTCAGATGGAACAAAACCCAATTTAAAGAACAAAAAAGGTGCTTCAAATCCTCAAAGTGCAAAAGAAATATCAAATCTGAGGGAGAAAATAAAAACTCTTGAGGGCATGATAAAGTCCAAGGAAACTGCTTTGGAAATATCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAGCTCCAATCCAAAATTGAGGAATTGGAAAACAAAGTAGAGGAATTCAATCAGAGCATTGCTTTGCAAAAGGTTGATGAGGATAAGGGTATTTCTACTTCAAATGATACTACAAGCGTGGCTGAGGAAAATGGTGTTGCATTGACATTGTTCAAGAGTAATTTATCTTTGGCGGGGAAAGAAGCAGAAAGATCCAGAATGGATGATGATGATAATGGAGATGGCAATCTTTGTGAAAGTTTAGCTGAATTATCGGTGTTGAAGGAAAGAAACAACTTAATGGAAAGTGAGCTTAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTGAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTAAGAAACCTGAAGAATGCTCGGAAGGCTCAATGA 3234 0.4131 MFRWRSEKHKVKAVFKLHFHVTQMVQSGVESLVLSIVPGDIGKVTTRLEKAAIRGGVCRWENPVYETIKLFQEPKTGKFSERVYYFVVSTGLSKVSSFGEVSVDFSEYAEATKPSTVSLPIKNSHCEAVLHVSIQRLQENNDKRPQEDCEGTELKPNDRSLRTYLSNGEIDASLKSDSSEDVSAKENGNGAELSADCRTSSGSDITTLSSDGSSGLDTPREVGVRNGGGIHPNNNGFVSDVSHTSDSQKPAINDIHQRSHWDWSGGSEHSLSTDGSTNSSHQTSDVEIGRLKVELAALTRQVDVSDLELQTLRKQIVKESKRTQELSKEIICVKEERDALKVECDNLRSFHKRMEDAKLSNRKPLDSGDLCTLVEEIKQELKYEKELNANLQLQLKKTQESNADLVLAVQDLDEMLEQKNREMCSLSNKNEEGKISRESEGKLSNSETDDEQKELEELVKEHSNAQETHLLEQKIMDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECCSPPAVDEIDAHIQNLENQLKQQSEELSNSLATVKDLGNQISRLEEELEKQAQGFEADLDAVTRAKVEQEQRAIQAEEALRSTRLKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEASELRAQKRLVEAMLHKVSDELQSAKADYEVKLDELSDKIDMMAAQKQQMLLEIDDKTKQLENQKKREEQVSRGFFEEIQMLKAENERLKVEISCLSEKVEQKDILRNDLELVKKSLEESEARLNSRTVERNELVSEIALLKKEAERSFDELNGMKHLNDEKEIETRVLQSELEELRAQYSDLKRACFEDEAEKENLRKHVFQLKGELKKKDDALTNIEKRFKDSNGRTQLSDGTKPNLKNKKGASNPQSAKEISNLREKIKTLEGMIKSKETALEISASSFLEKERELQSKIEELENKVEEFNQSIALQKVDEDKGISTSNDTTSVAEENGVALTLFKSNLSLAGKEAERSRMDDDDNGDGNLCESLAELSVLKERNNLMESELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNARKAQ 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00604 1077 MobiDBLite consensus disorder prediction 876 906 - -
Viun3g00604 1077 Coils Coil 1025 1059 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 193 216 - -
Viun3g00604 1077 Coils Coil 402 422 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 882 906 - -
Viun3g00604 1077 Coils Coil 908 928 - -
Viun3g00604 1077 Coils Coil 475 509 - -
Viun3g00604 1077 Coils Coil 733 753 - -
Viun3g00604 1077 Coils Coil 295 343 - -
Viun3g00604 1077 Coils Coil 933 967 - -
Viun3g00604 1077 Coils Coil 538 618 - -
Viun3g00604 1077 Coils Coil 673 725 - -
Viun3g00604 1077 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
Viun3g00604 1077 Coils Coil 374 394 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 264 285 - -
Viun3g00604 1077 Coils Coil 757 781 - -
Viun3g00604 1077 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1075 - -
Viun3g00604 1077 Coils Coil 445 468 - -
Viun3g00604 1077 Coils Coil 813 847 - -
Viun3g00604 1077 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 137 285 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 137 157 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 159 173 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 423 452 - -
Viun3g00604 1077 MobiDBLite consensus disorder prediction 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00604 Viun-Chr3 3713966 3718980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00604 - - gmx:100819574 1696.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00604 3 3713966 3718980 Viun3g00604 3 3713966 3718980 ECH
Viun2g02563 2 31711101 31715367 Viun3g00604 3 3713966 3718980 PCT