Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00601 ATGGAAGAACCTCCAACTTCAGTTCCGGCGACAGCGTCATGCTGGAGCAACGTGGTGAAGAAGCAGCCACCTCCACCACCGCAGCACAACGTTCCAGTATTGGTGGAAACCACCGAATCCTCCAATGCCATCGCCGTAGCCGTTGTGGACGCCAACGCAGTCATCGAATCCGGCGAAAAGCTCCACGGCCTCGCCGACAAGTTCATCTCCATCCCTGAAGTTATGCAGGAAATCCGTGACCCCGTTTCCCGCCACAAACTCTCTTTCCTCCCCTTCTCCATTCAAACCATGGAGCCCTCCCCGGAATCCATCAATAAAGTTGTCAAATTTGCTAGGGCTACTGGTGATCTACAAACTCTATCTGATGTTGATATCAAGCTCATTGCTCTGACTTACACGTTGGAGGCTCAGATTCATGGGACCAAACATCTCAGGGATGCCCCTCCCCCTGTGCAAACGTTGAATGTGAAGAGGTTGCCTGAGAAGGACATGCCGGGGTGGGGTTCTAATGTGCCTAATTTGAAAGAGTGGGAGGCGTTGGAACAGGCGGAAGACTCTATGAATTCCAATTCGAAAATCCTTCCTTTGCAGGATCTGAACTTGAACATTGTTTCTCCTGATGATCACACTGTGGACGGTTCTGTGGAGAGGACGAGTGAAGCTGATTCGGGGATTCAGGATGGCGGTGAGGATGGGTTTACGAAGCCTAGGAGATTCACGCCTAAGAAAAAGGAGATAAAAATTGAGGGAAAAACAATGGTGGCTGATGGAATCGATGCGTCGCAGGGCGAGTTTGATGACAATGCTGGTGATTGGATGCCGGCTGTCAGTCGGAGTACTCACAGGAGATACTTGAGAAGGAAAGCTAGACGTGAGTATAATGAGTCGATATCCAGTACTCAAGATGAACAAGATTTGGAAGGAAAGGATGATAACGTTGGTGGGGATGTTGGTGTTTTAAATCAGCAAGTTCATGAAAGGGATCCTCAACAAGTTGAAAATGCTGTGTCTGAGAATAATCAGGTGGTAAAAGAGAACAAAGACAATGAAAGTATATATGAGATTCTCCAGCAAATGAGACTGGAGGAAGGTTCTCTTGAAGTTCTTGATGAGGAAAATAAACCAAGTTTATCTTCCGAAGAACTCCAGTCATACAATACTGGATTGGTGGCAACAGTACCTGATGGCAATGCAGATGTGGTCACTAAATCACGTGACAGTGAGATAAATACAGTTGATAGCCAATCAAATCACTTGGAAATTGCAAGTCAGACCAGTGAAGCTGCTGACTTTTCATATGCTGATGATGATGGTAGTGAGCAAAGTTGGATGGTTAGATCTTTGTCTGAATCAAGTGTAGCATGTATAACCGGTGACTTTGCAATGCAAAATGTTCTTCTCCAAATGGGTTTGCGCTTGCGGGCACCCGGAGGAACACAAATACACCAGCTGCACAGATGGATACTCAAGTGTCATGCCTGTTACACTGTGACTGCTGAGATTGGTAGAATTTTCTGTCCAAAGTGTGGGAATGGTGGCACACTAAGGAAGGTTGCTGTCACAGTTAATGAAAATGGAATAGTAGTTGCAGCCCGCCGACCACGAGTTACATTACGTGGCACAAAGTTTTCATTACCTTTACCCCAAGGTGGAAGGGATGCAGCTACAAAGAACCCCATTCTCCGTGAAGACCAACTTCCTCAAAGGGTACTTTATCCTAAAACGAAGAAGAAAACCAGCAAACAGGATGATGACTTTTTTACACCAGATAGTGTCTTCAGCCACCACACAGATAAGAAAGCTCCTTTCCAGCCTCCTATAAGGAAAGCAATGGCAGTTTTCGGTGGAAGGAGAAATCCAAATGACAATCACTACTCACGCTCCAAGCATAAATAG 1896 0.4615 MEEPPTSVPATASCWSNVVKKQPPPPPQHNVPVLVETTESSNAIAVAVVDANAVIESGEKLHGLADKFISIPEVMQEIRDPVSRHKLSFLPFSIQTMEPSPESINKVVKFARATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDAPPPVQTLNVKRLPEKDMPGWGSNVPNLKEWEALEQAEDSMNSNSKILPLQDLNLNIVSPDDHTVDGSVERTSEADSGIQDGGEDGFTKPRRFTPKKKEIKIEGKTMVADGIDASQGEFDDNAGDWMPAVSRSTHRRYLRRKARREYNESISSTQDEQDLEGKDDNVGGDVGVLNQQVHERDPQQVENAVSENNQVVKENKDNESIYEILQQMRLEEGSLEVLDEENKPSLSSEELQSYNTGLVATVPDGNADVVTKSRDSEINTVDSQSNHLEIASQTSEAADFSYADDDGSEQSWMVRSLSESSVACITGDFAMQNVLLQMGLRLRAPGGTQIHQLHRWILKCHACYTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIVVAARRPRVTLRGTKFSLPLPQGGRDAATKNPILREDQLPQRVLYPKTKKKTSKQDDDFFTPDSVFSHHTDKKAPFQPPIRKAMAVFGGRRNPNDNHYSRSKHK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00601 631 Gene3D - 38 151 - -
Viun3g00601 631 MobiDBLite consensus disorder prediction 212 237 - -
Viun3g00601 631 Pfam PIN domain of ribonuclease 48 134 IPR033411 -
Viun3g00601 631 MobiDBLite consensus disorder prediction 576 603 - -
Viun3g00601 631 MobiDBLite consensus disorder prediction 291 316 - -
Viun3g00601 631 SUPERFAMILY NOB1 zinc finger-like 481 544 IPR036283 -
Viun3g00601 631 PANTHER RNA-BINDING PROTEIN NOB1 34 629 IPR039907 -
Viun3g00601 631 CDD PIN_Nob1-like 57 159 IPR033411 -
Viun3g00601 631 Gene3D - 475 549 IPR036283 -
Viun3g00601 631 MobiDBLite consensus disorder prediction 573 606 - -
Viun3g00601 631 FunFam 20S-pre-rRNA D-site endonuclease NOB1 38 158 - -
Viun3g00601 631 MobiDBLite consensus disorder prediction 291 312 - -
Viun3g00601 631 Pfam Nin one binding (NOB1) Zn-ribbon like 481 551 IPR014881 -
Viun3g00601 631 MobiDBLite consensus disorder prediction 1 30 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00601 K11883 - gmx:100800291 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00601 3 3688082 3691235 Viun3g00601 3 3688082 3691235 ECH