Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00598 ATGGAAGAAGAGGGCAAAATAACAAAAGGAAAATATGCTGCTGATATTTCCTCCATAAGAGAAGCACATGACCGAATCAAATCATTGGTTCATAAAACTCCGCTTCTGTCCTCCACCTCGCTGAATGTTTTGTCAGGAAGACAGCTCTACTTTAAGTGTGAATGTTTACAAAAGGGGGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCTGTGTTCTCTCTCAACGATGAAGATGCTTCTAAAGGGGTTGTAACACACAGCAGTGGAAACCATGCTGCAGCATTGGCTTTGGCCGCTAAACTACGGGGGATCCCTTCATATATTGTTGTTCCAAAAAATGCCCCAACTTGCAAAATTGAGAATGTAAAGCGGTATGGTGGTCAGATTGTCTGGTCTGAGGCCTATGTTCAATCCAGGGAAGAAGTTGCAAACAAAGTGTGGCAAGAAACTGGTGCTATCTTTATACACCCGTATAATGATGGACGCATATTAAGTGGCCAGGGTACCATATCCTTGGAGATTCTGGAGCAAGCCCCACATATAGATACGCTAGTGGTACCCATAAGTGGTGGTGGTTTGATATCTGGAATAGCATTGGCTGCCAAGTCCATCAACCCTGCTATTCGTATTTTAGCTGCTGAACCTAAAGGAGCTGATGATGCCGCCCAATCTAAAGCAGCTGGGAGGATAATAAGATTGCCTGAGACAGATACTATAGCTGACGGTCTTCGAGCATTTCTTGGAGATTTCACATGGCCTGTAGTACGAGATCTTGTTGAGGACATTATAACTGTTGAAGACAGTGAAATAATCAAAGCTATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGATACCTTCCAGAATAATCCTTCTTGGAAGGAATGCAACCACATAGGAATAGTACTTTCAGGAGGCAACGTTGATCTGGCTGTGCTTTGGGATTCTTTGAAGAAAGAAAAATGA 1008 0.4286 MEEEGKITKGKYAADISSIREAHDRIKSLVHKTPLLSSTSLNVLSGRQLYFKCECLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLRGIPSYIVVPKNAPTCKIENVKRYGGQIVWSEAYVQSREEVANKVWQETGAIFIHPYNDGRILSGQGTISLEILEQAPHIDTLVVPISGGGLISGIALAAKSINPAIRILAAEPKGADDAAQSKAAGRIIRLPETDTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQNNPSWKECNHIGIVLSGGNVDLAVLWDSLKKEK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00598 335 Pfam Pyridoxal-phosphate dependent enzyme 29 317 IPR001926 -
Viun3g00598 335 Gene3D - 62 158 IPR036052 -
Viun3g00598 335 Gene3D - 25 323 IPR036052 -
Viun3g00598 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 8 326 - -
Viun3g00598 335 CDD Thr-dehyd 16 323 - -
Viun3g00598 335 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Viun3g00598 335 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Viun3g00598 335 FunFam L-threonine dehydratase catabolic TdcB 139 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00598 Viun-Chr3 3680977 3683822 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00598 K12235 - gmx:100799758 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00598 3 3680977 3683822 Viun3g00598 3 3680977 3683822 ECH