Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00591 ATGGCCACTCAACCCACCAACCATCCAAACTCTGTATACGATTTTACCGTCAAGCAGGATACTAAAGGTGATGATGTTGATCTTGTCACTTACAAGGGAAAAGTATTGGTCATTGTTAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATATGAGAAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAAGAACCTGGAAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCTTTATACAAATTCTTGAAGTCAGGTAAGTGGGGAATATTTGGGGATGATATTCAGTGGAATTTTGCAAAGTTTCTAGTTGATAAGGACGGGCAAGTGGTGGATCGCTATTATCTCACCACATCTCCTCTTAGCCTTGAGCGAGACATCCTTAAGCTACTTGGTGTTGTCTGA 516 0.4031 MATQPTNHPNSVYDFTVKQDTKGDDVDLVTYKGKVLVIVNVASKCGMTNSNYVELNQLYEKYKDKGLEILAFPCNQFGEEEPGSNDQIKEFVCTRFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYLTTSPLSLERDILKLLGVV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00591 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 PRINTS Glutathione peroxidase family signature 31 48 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 PRINTS Glutathione peroxidase family signature 67 83 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 PANTHER GLUTATHIONE PEROXIDASE 6 168 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 ProSitePatterns Glutathione peroxidases active site. 33 48 IPR029759 -
Viun3g00591 171 CDD GSH_Peroxidase 11 164 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
Viun3g00591 171 FunFam Glutathione peroxidase 3 170 - -
Viun3g00591 171 Pfam Glutathione peroxidase 12 121 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 ProSiteProfiles Thioredoxin domain profile. 6 169 IPR013766 -
Viun3g00591 171 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Viun3g00591 171 Gene3D Glutaredoxin 1 170 - -
Viun3g00591 171 ProSitePatterns Glutathione peroxidases signature 2. 70 77 IPR029760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00591 Viun-Chr3 3650745 3652817 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00591 K00432 - gmx:100808523 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00591 3 3650745 3652817 Viun3g00591 3 3650745 3652817 ECH
Viun2g02576 2 31784172 31788653 Viun3g00591 3 3650745 3652817 PCT