Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00582 ATGGGACAAGAGTTGGAGCTGGATCTTGATGACAAGTCTTCAGTGGGTCTGAGTCCAAATACTGTTCTTCCATCTCAGCAATACTGTGTGAATGTGAAGAAGATATCAAAGAAAGGGAAACCCACTGGAAAAGATGAATTTTTTACTCTCAAGGAGGGCTTTGCTGAGATCAAATTTGCTCGCTTCCGCAGTTCTTCGTGTAAGAATCATCTCTCTAAACCTCATGGATTGGAAGGTAATATAGAAACCAGGCGCACTTCCATGTATCAGAGTTCAGAAGAACTGAAAAGCAGAAAGAAAATGGGCACCATGATAGAGGGAAGGAAAAAGATAGAAATTTCAAGGAGAAGTGACGCCTCCTTCACAGGTAGCATTGTTGATTCGTTGTGTGGTTCAGATGATGAAGGTTCTGGGGTTAGATCTCCAAATAGTTTTATTGAAATTTGTATAAATTCAGATGTTAAGAATAAAAACTCCACAGCACGAGGGAGAGATTCTACAAATTTGAAGCCCAGAAGTGATAAAGTTGCTGATTCTGTAATCAATGGCAATTGTTCTGTTGAAAAGGACACAGTCCACTCGCTTCAAAAGTCATTCTCGGCTAAGGTAGAAGTCTCTCACTTGCCATCTCCATTGGGAAGTGATTGCTCATCAAGCGCAAGTCCAAAAGTCCAATTCATCCATAGCAGGAGAAGGTTGAATCATTTCACAAAGTCAAAATCACTGAGAAGTACAGTGAGTCAGGCACCGGAGAGTATCAAATCAAATGAGAAAGCAAACATTGCAGCAAGAAATAGGACTTATCAGAAATCATTGTTAAATGACTTGTCCAAAACAGGAAAGCATTCTGATATCATTTCTGAGTTTATCAACAGAGAAATCCAGTATTCAGGTATAGCTTCTTCACCAGTTCACCTGCATGGCAATCTCAAGTTGGAAAATAAACATGGAGTGCCCTTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTTTATGTGGCCAAGACATGGAGAACAGGTAATGCTTTCAACTGGGTGTATACCTTTCATTCCATTGATAATAGAAAGAAGAGCAATGCTACTGGGTTGGGATACCATGATTTTGACAAAGATTCCTCAACAGTTGCACAGATGCTAGTTTCATGTAATTTATGTTCTGAACTAGAAGGCAAAGTGTTTGACAACTCTATGGTGACAGAATTTGTATTATATGATTTTACACACTCAAGACAAAGCGTTTCGCGTGAGAAGTCTTTCAGTGAACCAGATGCTTCTAACACTTTGAAAGCTTCCAATGTTGGATGGAAGGAAGAAGCTATGGGGTTGGATGAGAATCGTGCAGTTAAGAACAAACCTCAAGACAAATCTCCACTGAGCAATGTTGAATTTGATGATTTAAGTTCTTTTCCTTGCTCACCCACAGAATGCCATTCAAACCTTGAAATTGGTGCCATTGTCTTACAAATTCCGTTTTCCAAGAGAGAAAGCTTGAAGTACAAAAGAGGGGACATAATGAGTGGTAAAGAACATTCCAACATAAGAGATCTATCTGCCGAAATAGATAGAAAGAGTCTTCATCACAGCAAAATCCAGGAACAGGTGAAGGTGGTAATACCAACTGGTAATCATGGTTTGCCAAATGCTGAAAGCAAGGGACCCTCATCATTACTTGATCGACTGCGACATGGTGGAGGCTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCTAGTATTCAATTTTCTGAGGACTGCCCACTTTTTGAAGAACATCAACCGTTGGAACTTTTTGTTCAGGGAGCAAAAGGAAGCAGTCCTACCTTCAGCATGACAAGAATTGAAGAGGGGCATTATGCTGTTGATTTTCATGCACAGTTATCTGCTTTACAAGCATTCTCAATCTGTGTTGCCATTTTGCATGGAACTTCGGCCTCCGGCGGTGGAGGGCATGAAAACAACCAACAGTCATCTCAATGCAGTTCACTGAAAATGCTTCTTGAGGAGGATGCAGATTTTTTTTTCAAATCAGTCACAACTGAGAAGAAGACTGGTTGCAAGAATCCAAAAGTAGTTCCTCGATCCTATGTGCTGAACCCACCCTTTTCTCCTATTGCACGCGTATAA 2142 0.4085 MGQELELDLDDKSSVGLSPNTVLPSQQYCVNVKKISKKGKPTGKDEFFTLKEGFAEIKFARFRSSSCKNHLSKPHGLEGNIETRRTSMYQSSEELKSRKKMGTMIEGRKKIEISRRSDASFTGSIVDSLCGSDDEGSGVRSPNSFIEICINSDVKNKNSTARGRDSTNLKPRSDKVADSVINGNCSVEKDTVHSLQKSFSAKVEVSHLPSPLGSDCSSSASPKVQFIHSRRRLNHFTKSKSLRSTVSQAPESIKSNEKANIAARNRTYQKSLLNDLSKTGKHSDIISEFINREIQYSGIASSPVHLHGNLKLENKHGVPFFEFKVKCPEDVYVAKTWRTGNAFNWVYTFHSIDNRKKSNATGLGYHDFDKDSSTVAQMLVSCNLCSELEGKVFDNSMVTEFVLYDFTHSRQSVSREKSFSEPDASNTLKASNVGWKEEAMGLDENRAVKNKPQDKSPLSNVEFDDLSSFPCSPTECHSNLEIGAIVLQIPFSKRESLKYKRGDIMSGKEHSNIRDLSAEIDRKSLHHSKIQEQVKVVIPTGNHGLPNAESKGPSSLLDRLRHGGGCDCGGWDMACPLILLGNPSIQFSEDCPLFEEHQPLELFVQGAKGSSPTFSMTRIEEGHYAVDFHAQLSALQAFSICVAILHGTSASGGGGHENNQQSSQCSSLKMLLEEDADFFFKSVTTEKKTGCKNPKVVPRSYVLNPPFSPIARV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00582 713 PANTHER EXPRESSED PROTEIN 7 137 - -
Viun3g00582 713 Pfam Domain of unknown function (DUF3527) 303 647 IPR021916 -
Viun3g00582 713 SUPERFAMILY Tubby C-terminal domain-like 581 647 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00582 Viun-Chr3 3590114 3594137 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00582 - - gmx:100811734 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00582 3 3590114 3594137 Viun3g00582 3 3590114 3594137 ECH
Viun2g02589 2 31851445 31855283 Viun3g00582 3 3590114 3594137 PCT