Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00559 ATGGAGACACCAAAGGAAATATTCTTAAAGGATTATAAGATGCCCGATTACTACTTTGACACTGTGGATCTAAAATTTTACCTGGAAGAGGAGAAGACAATAGTTAGTTCTAAAATTTCTGTGTATCCTCGCATTGAAGGTTCTTCTCCACCTCTAGTTTTAGATGGACAAGATTTACGTTTAGTTTCAGTTAAGCTGAATGGAAAGGCTTTGAAGGAGGAAGATTATCATTTGGATGTACGTCATCTCACAATCCCATCACCTCCTAGTGGTAAATATGATCTCGAAATTGTCACAGAGATTCATCCACAGAAAAATACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGTTTCCGTAAAATTACATTTTATCAGGATCGACCTGACATAATGGCAAAATATACAGTTCGAATTGAGGCTGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTGGCTGAGCAAGGTGACCTAGAGGACGGGAGGCATTACGCCATTTGGGAAGACCCCTTCAAGAAACCTTGTTACCTGTTTGCCTTGGTTGCCGGACAATTACAGAGCAGAGATGACGCATTTATTACCCGTTCAGGGCGGAATGTATCCCTTAGGATATGGACACCTGCAGAAGATGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCGATGGAGAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAGACTGCTACTGATGCAGATTATGCTGCAATATTGGGGGTTATTGGACATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACTTGTCGAGACTGGTTCCAGCTTAGCCTGAAAGAAGGTCTCACAGTTTTTCGCGATCAGGAATTTTCATCTGATATGGGAAGTCGAACTGTGAAGCGTATTGCTGATGTTTCTAATCTTAGAAATTACCAGTTTCCACAGGATGCCGGCCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGATGGACAACTTCTACACAGTTACGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTATTAGGAAGTCAAGGGTTCCGAAAAGGCATGGATCTTTATTTCAAGAGACATGATGGTCAAGCTGTAACATGTGAAGATTTTTTCTCTGCCATGCGGGATGCAAATGATGCTGATTTTGCAAATTTCTTGTCATGGTATTCTCAAGCTGGGACCCCTGTTGTGAAAATAAACACTTCTTATAATTCAGAAGCACATACTTTTTCTTTGAAGATTAGTCAAGAGATACCGCCAACTCCCGGACAATCAGTTAAGGAACCCACGTTCATTCCTGTTGCAGTGGGTTTGCTTGATTCCAAGGGCAAGGACATACTTCTTTCAAGTCTTTATCATAATGGGACTCTGCAATCTGTTTCAAACAGTAATCAACCAGTCTACACTACAGTCCTTAGAGTCACCAAGAAAGAGGAAGAATTTGTATTCACTGATATATTTGAGAGGCCTGTTCCTTCTTTGTTACGGGGATACAGTGCTCCTGTTCGTCTGGAATCTGATCTCACTGAGAGCGACCTGTTTTTCCTGCTAGCTAATGATTCTGATGAATTCAACCGTTGGGAGGCCGGACAAATTTTGGCACGAAAGTTGATGCTCAACTTGGTGGATGATTTTCAACATAACAAACCATTGGTTTTGAATCCCAACTTTGTTAACGGGTTCAAAAGTATTCTATGTGACTTAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCTGGGGAAGGAGAAATAATGGACATGATGAAGATTGCAGATCCAGATGCTGTTCATGCTGTTCGGACTTTCATCAGGAATCAGCTTGCAAGTGAACTGAGATTAGAGTTCTTTAACACAGTAGTAAATAATAGGAGCACAGAAACATATGTCTTCAATCACCCAAACTTGGCCAGGCGTGCTCTGAAGAATATTGCTCTTGCTTATCTTGGATGCCTCGGGGAACAAGAATTCACCGAGCTTGCACTGCACGAGTACAAATCTGCCACAAACATGACTGAACAATTTGCGGCTTTGGCTGCCATAGCCCAAAAACCTGGTAAAACCCGTGATGATGTTCTAGCTGATTTTTATGGAAAGTGGAAGCATGATTTCCTGGTGGTGAACAAATGGTTTGCTCTGCAATCAACGTCTGATATTCCTGGTAATGTTGAGAATGTGCGGAAACTGTTAAACCACCCAGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCGGTGAACTTTCACGCGAAGGATGGATCAGGCTACGAATTTTTGGGAGAACTTGTGCTGCAACTAGACAAGCTAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTTATGACGAAAGCAGACAAAATCTTGCAAAGGCACAATTGGAGAAGATCGTGTCTAGTAATGGACTATCGGAGAATGTGTTTGAGATAGCATCGAAAAGCTTAGCTGTTTGA 2664 0.42 METPKEIFLKDYKMPDYYFDTVDLKFYLEEEKTIVSSKISVYPRIEGSSPPLVLDGQDLRLVSVKLNGKALKEEDYHLDVRHLTIPSPPSGKYDLEIVTEIHPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLEDGRHYAIWEDPFKKPCYLFALVAGQLQSRDDAFITRSGRNVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSNLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFSAMRDANDADFANFLSWYSQAGTPVVKINTSYNSEAHTFSLKISQEIPPTPGQSVKEPTFIPVAVGLLDSKGKDILLSSLYHNGTLQSVSNSNQPVYTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWEAGQILARKLMLNLVDDFQHNKPLVLNPNFVNGFKSILCDLSLDKEFVAKAITLPGEGEIMDMMKIADPDAVHAVRTFIRNQLASELRLEFFNTVVNNRSTETYVFNHPNLARRALKNIALAYLGCLGEQEFTELALHEYKSATNMTEQFAALAAIAQKPGKTRDDVLADFYGKWKHDFLVVNKWFALQSTSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYEFLGELVLQLDKLNPQVASRMVSAFSRWKRYDESRQNLAKAQLEKIVSSNGLSENVFEIASKSLAV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00559 887 Gene3D tricorn interacting facor f3 domain 14 197 IPR042097 -
Viun3g00559 887 FunFam Aminopeptidase N 14 197 - -
Viun3g00559 887 FunFam Puromycin-sensitive aminopeptidase 562 886 - -
Viun3g00559 887 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 1 886 IPR012779 GO:0008270
Viun3g00559 887 FunFam Aminopeptidase N 283 446 - -
Viun3g00559 887 Gene3D - 198 282 - -
Viun3g00559 887 FunFam Putative aminopeptidase N 199 282 - -
Viun3g00559 887 Gene3D - 562 886 IPR037144 -
Viun3g00559 887 Pfam Domain of unknown function (DUF3458) Ig-like fold 447 560 IPR035414 -
Viun3g00559 887 PRINTS Membrane alanyl dipeptidase (M1) family signature 179 194 IPR001930 GO:0006508
Viun3g00559 887 PRINTS Membrane alanyl dipeptidase (M1) family signature 297 312 IPR001930 GO:0006508
Viun3g00559 887 PRINTS Membrane alanyl dipeptidase (M1) family signature 261 271 IPR001930 GO:0006508
Viun3g00559 887 PRINTS Membrane alanyl dipeptidase (M1) family signature 316 328 IPR001930 GO:0006508
Viun3g00559 887 Pfam Domain of unknown function (DUF3458_C) ARM repeats 565 886 IPR024601 -
Viun3g00559 887 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 5 195 IPR042097 -
Viun3g00559 887 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 207 453 - -
Viun3g00559 887 NCBIfam aminopeptidase N 11 885 IPR012779 GO:0008270
Viun3g00559 887 Gene3D Neutral Protease Domain 2 283 446 IPR027268 -
Viun3g00559 887 Pfam Peptidase family M1 domain 231 441 IPR014782 GO:0008237|GO:0008270
Viun3g00559 887 Pfam Peptidase M1 N-terminal domain 15 189 IPR045357 -
Viun3g00559 887 CDD M1_APN 11 444 - -
Viun3g00559 887 FunFam Aminopeptidase N 447 561 - -
Viun3g00559 887 Gene3D - 447 560 IPR038438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00559 Viun-Chr3 3452055 3461947 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00559 K01256 - gmx:100803548 1642.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00559 3 3452055 3461947 Viun3g00559 3 3452055 3461947 ECH