Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00534 ATGCCTGCAACAACAGAGAACCAAGGCTCGTTTCTGGGCCGAATAAGCATACGTAGAAATCAAGTCATGTCCATGGATGGAACCCACGACCAAGAAATGGAAGACCTCGAACTTTTCCAGAAGCACGTCGGAGACCGCTTCTCCGAACTCTTATCCACCACCACGGAGGACTCCTCCGGCGACGCCCTCCTCTCCATCTCCTGGCTCCGCCGCCTCCTCGACGAGCTCCTCTGCATCGAGGCAGAGTTCAAAGCCGTTGTGCTCATGGGCCGCGACCCCTCCCAGATCGCCAAGCCGCCGCTCGACAAGCTCCTCCCAGAGTTCCTCGACCGCTTCGTCAAATCCCTCGACCTCTGCAACGCCGTCGCGCTCGGCCTCGACGCCGTCAAGAACCTCCAGCGCCTCGCCGAGATCGTCGTCGACGCGCTCGAAGTGACGCCGCTGGGCGACGGCCAGGTCCGCCGCGCGAAGAAGGCGCTCTCCGCCCTCATCGCCGCCATGCTGCACGAGGACAACGCCAACGCGAAGGGGACCGAGCGCAACCGGTCCTTCGGGCGGCGCACCAACAACTCCGGGTCGAACAGCAAGGACCGGGTGCGGGCGCTATCGTGGACGATGGCGCGGAACTGGTCGGCGTCGAAACAGATCCACGCGATGATGTCGAATCTGACGGCGCCTCGCGGCGCCGAATCGTCGGGATTGGCGCAGCCCGTTTACATAATGAGCACTGTGCTGATGTTCGTGATGTGGGCTTTTGTGGCAGCGGTTCCATGCCAGGAGAGGAATGGGTTGGGGACGCACTTTCCCCTGCCCAGGCAATTGAACTGGGCCCAGCCCTTGATCGGGTTGCAGGAGAAGATCGCGGAGGAGTGGAAGAAGAAGGAGAAGAAGGGCAACGTGGGTTTGTTGGAGGAGATGCAGAGGATGGAGAAGCTGGCGCAGTCGCTGGTTGAGTTCGCTGACTCCTTTCAGTTTCCCCCCGAAACGGAGCGTTTGGATGAGATGAAGAGAAACGTTGAGGACTTGGCCGAAATTTGTAAGAAAATGGACCAAGGCTTGGAGCCCATGCAGCAGCAGATTAGGGAGGTCTTTCACAGGATTGTCAGGAGCAGGGCCGAGTTTCTCGTTGTCTTGGACCAAGCTGGCAAGTTGTCTGCACCCGCCGTTTAA 1170 0.5991 MPATTENQGSFLGRISIRRNQVMSMDGTHDQEMEDLELFQKHVGDRFSELLSTTTEDSSGDALLSISWLRRLLDELLCIEAEFKAVVLMGRDPSQIAKPPLDKLLPEFLDRFVKSLDLCNAVALGLDAVKNLQRLAEIVVDALEVTPLGDGQVRRAKKALSALIAAMLHEDNANAKGTERNRSFGRRTNNSGSNSKDRVRALSWTMARNWSASKQIHAMMSNLTAPRGAESSGLAQPVYIMSTVLMFVMWAFVAAVPCQERNGLGTHFPLPRQLNWAQPLIGLQEKIAEEWKKKEKKGNVGLLEEMQRMEKLAQSLVEFADSFQFPPETERLDEMKRNVEDLAEICKKMDQGLEPMQQQIREVFHRIVRSRAEFLVVLDQAGKLSAPAV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00534 389 MobiDBLite consensus disorder prediction 184 198 - -
Viun3g00534 389 Coils Coil 332 352 - -
Viun3g00534 389 MobiDBLite consensus disorder prediction 176 198 - -
Viun3g00534 389 PANTHER BPS1-LIKE PROTEIN 15 377 - -
Viun3g00534 389 Pfam Protein ROH1-like 4 377 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00534 Viun-Chr3 3252479 3254195 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00534 - - gmx:100814592 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00534 3 3252479 3254195 Viun3g00534 3 3252479 3254195 ECH