Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00521 ATGGCTCAGCAGAGTCCTGATCAGCAGATCAAGCCCTTGGCTCCATTCATATCTTCATCCCACTTCAACTCACAAGAAGATCAAGACTACTCATTCACACACAGAAAAAACATTCGACTAAGAAAGTTTATCCTGTGCTGCGGTTGTGCCACTGCAATTGTTGTGGTTCTTGTGGTCATAGTACTGGTCTTGGGCTTCACCGTTTACAATGTCAAAGACCCCGAGGTGAGGATGAACGGGGTTACCCTTATCAATGGAACTTTCGCCAACGGTGCTACTGACAACGTTACAATTCTTGCCGATATATCTGTGAAGAATCCAAACGTTTTTACCTTCAAGTTTGGAAACGCCAGCACCGATGTTTACTATAATGGGGAGGGAATAGGTGATGGTGAATCTCCGTCGGGGAAAGCCAAGGCCAGAAGAACCATAAGGGTCAACACCACCATGGAGATTATGGCAAAGAAGCTTCTGGCGAATCCAAATTTCGATACTGATCTAAAGGATCAGGCTTTGAATATCAGCAGCTATACCAGGATTGATGGTAAGGTCAAGATATTTAACATTTTTCCGAGGAAAGTTGTGGTTGAGATGAATTGCACAATCACATACAACATCACCACTGGGTTGATTACAAATGGTGGCAATTGTCTTGGAAACGTTAATATTTAG 672 0.433 MAQQSPDQQIKPLAPFISSSHFNSQEDQDYSFTHRKNIRLRKFILCCGCATAIVVVLVVIVLVLGFTVYNVKDPEVRMNGVTLINGTFANGATDNVTILADISVKNPNVFTFKFGNASTDVYYNGEGIGDGESPSGKAKARRTIRVNTTMEIMAKKLLANPNFDTDLKDQALNISSYTRIDGKVKIFNIFPRKVVVEMNCTITYNITTGLITNGGNCLGNVNI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00521 223 SMART why 81 203 IPR013990 GO:0009269
Viun3g00521 223 Pfam Late embryogenesis abundant protein 102 201 IPR004864 -
Viun3g00521 223 Gene3D - 60 205 - -
Viun3g00521 223 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 35 206 - -
Viun3g00521 223 SUPERFAMILY LEA14-like 55 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00521 Viun-Chr3 3076133 3077053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00521 - - gmx:100527705 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00521 3 3076133 3077053 Viun3g00521 3 3076133 3077053 ECH