Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00488 ATGGTGAAACATCGCCTTAGAGACTCTATCAAATCTTTGTTTGGAAGTCATATTGACCCTAATAAAGAAGAGCTCCACGTAGCTAAAGCAGATATTGAAGACAAAGTGAAAGAAATATTGAAACTTATTAAAGATGACAACCTTGAAGAGGATGGTACCCCAGTGCAACTTTCCAAGAGAGAACCACTTGTTGAACTGATTGAAGATTTCCACAATCAATACCAATCACTGCATGCGCAATATGATAATCTAACTGCTGAGTTAAGGAAAAGGATCAAGGGCAAGCGAGAAAATGGGAGTTCTTCATCCAGCTCGGACTCAGATTCAGGTTCAGATTATTCTTCAAAGGACAAAGGCAACAAAAACGGACAACTGGAAAATGAATTTCAAAAGACAATCGATGGCTTAAAGCAAGAGCTTGAAGGGGTGCATGCAGAAGTGGCTGAATTAAATCGGAAGTTGACAATTTCACATGAAGAGAATGCTGAACTAAGTAAACAAGTGGATATTGCTGGCAAAAAAGAAGCTGAACTGAGTCAAAGATTGGAAGAGTTGAAGATAGAAAAAGATAGTTTGATCATGGACAAGGAGACAGCTCTCCAACAGATTGAGGAGGAGAAGAAGATTACTAATGGCCTCAAAACCCTTGTTGATCAACTGAAAGATGAGAAATTAGCTCTTGGCAAAGAATTAGAGGCAGTTACGGGTGAACTTTCCGTTCTCAAACAGCAGTTGGAACACGGAGAACAGAAAATGACAGGTATAAGCCACAATCTGGAAGTTGCTGAGGAAGAAAACAAATCTTTAAAAGAGCAACTTTCACAGGCTTCAAATGAGGTTCAGCTGGCTCAGAGTAGAATACAAGAATTTGTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGAGAGTGGAAGGGAAATTAATGCCTTTACTCAGATGCATGAAGGTTTTCAGAAAGAATCCTCAAATCGTATTGGGGAACTTGAGGCACAGGTCACCAACCTGGAGTTGGAGTTAGAATCACTGAAAAACCAGAAAAGAGATCTAGAAGTACAAATGAAGAGCAGCAACACTGAAGCAAGGGAGCTAGGAGAGCACAATTCAGGCCTACAAAACCAAATATCACAACTCGAGTTGAAGTCCAAAGAAAGAGAAGAAGAGCTATCTGCTATGGTGAAGAAACTTGAAGATAATGAGAATGAGTCATCTTTGAAAATTTCAGATTTAACATCTCAGATAAACAAGCTGCTAACTGATATTGGGACACTACATACTCAAAAAAATGAACTCGAAGAGGAGATAATTTTTAAAAGTAACGAAGCTTCCACTCAAGTGGAAAACATTACAAATGAGGCGAATGCATTAAAGCAAGAAGTGACGTCCCTCCAGCACCAGAAATCTGACTTGGAAGCTCAGTTAGAAGAAAAAGTCCACGAAAATTCCAAGAATATGATTGAAATGCAAACTCTGAAAGAGGAAATTGACAGAAAAATCCTTGAACAAGAGAGACTTCTGGAAGACAGAGAAAATTTAGCCATGCAGCTAAAGACATTGGAATCAGAGATGAACACCATTCAGAACAAAAACAGTGAAGCTGAAGAGCAAATAAGGACTAAAAGCCATGAGATCAGTCACATGAAACAGGAAATGTTGGAGCTACATGAAAAAATAGCAGAAATAGAGAAGATATCAACAGATAGAGAATCAAATTTGTTGATTCTCCGGGATAAGTTTATTAGCACAGAGCAAGCAGTTTCGGCTCAGATAATGGCCTCCAGTGAACAAATTAAGAATCTTGAACATGATTTGGCATCACTGCAGAAAGAGAAACAGGAATTAGAACAGCAGTGTGAAAAGCTGAAGTTGGAGGTGGATTCTATGCAGAACCAAAAGAGTGAAGTTGAAGAACAAATGAGAACTAAAAACCATGAGAACTCTGGACTACGAGAAGAAGTTTTGGGATTGCAGGGAACACTAGCTGTGCTGGAGAAGGCATTAGCTGAGAAAGAGACAGAGCTTTCCAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGTCAAATAACTGGCTTCATAGCCCAGATTGATAATCTAAAACATGATGTGGTGTCCCTTCAGAATGAGAAACGGGAAGTAGAACAGCAGTGTGTAAATCTGAAGATGGAGCTGGATTCCGCACAAAACCAGAAAGTTGAAGTTGAAGAGCAGTTGAGAACTAAAGACCAAGAGTACACGGAACTGAGAGAGGAAAAATATGGATTGCAGGGTACAATTACTGCACTACAGAAAACGTTAGCCGATAAAGAGGCAGAGCTATCCAGTTTGCAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGTCAAATAACTGCCTTGACAGTCCAGATTGAAAATCTAAAACATGATTTGGTGTCCTTGCAGAATGAGAAACAGGAAGTAGAACAGCAGTGTGAAAAACTGAAGGTGGAGCTGGATTCCTCTCAAAACCAGAAGGGTGAAGTTGAAGAGCAGATAAGAGCTAAAGACCATGTGAACACCGAACTGAAAGAGGAAATTTCGGGATTGCAGGGAACAATTACTGCACTGGAGAAAAGATTAGCTGAGAAGGAGTCAGATTTATCCATTTTACAGGAAAATCTTCACCAAAAGGAGAGTGAGGCTTCTGCCCAAATATCTGCCTTCATAGTCCAAATTGATGATCTGAAACATAATTTGGTGTCCCTACAGAATGAGAAACAAGAATTAGAACATCAGTGTGAAAAGATGAAGATGGAGGTGGATTCCACACAAAACCAGAAGGATGAAGTTGAAGAGCAAATCAGAGCTAAAGACCATGAGAACACTGAACTGAGAGAGGAAATTCTGGGTTTGCAGGGAACGATTGCTGCACTGGAGAAAACATTAGCTGAGAAAGAGTCAGAGTTGTCCACTTTACAGCAAAAGCTTGACGAAAAAGAGAGTGAGGCTTCCGGACAAGTAACTGCCTTCACGGCCCAAATTGATGATCTGCAGAAAGACTTACTTTCCTTACAGAAAACAAAAGAAGAATTGGAGCTCCAGCATGAAAAAATTAGTCAAGAACATGCAGAAAGCCTTGTAATGGTAGAGAATGAAAAGAATGACATATCAAGCAGGTCTATGGATCTTACGAGAACACTAGAAGAGCGAGAAGACTCATATCAGAGGTTAAATGAAGAATATAAACAAATTGATGGTTTGTTTCAGGAATGCGTTGTCAAGCTTGAAGTTGCAGAGAAGAAAATTGAAGAAATGGCAGCAGAGTTTCACGAACGCATTGAGTTGAAAGATCAGAAGGTAGCTGATTTGGAACATACAATAGAAGACCTAAGAAGAGACCTAGAAGAGAAAGGAGATGAAATCAGTACTTTGCTTGAGAATGTTCGGATGCTTGAGGTTAAGCTTCGTCTGTCAAACCAGAAGCTTCGGGTCACAGAACAATTGTTGAGTGAGAAAGAAGAAAGCTTTAGGAAGACTGAGGAAAAGTTTCAGCAAGATCAGAGAGCACTTGAAGACAGAATTGCTATTTTATCAGCAATAATAACTGCCAACAAGGAAGCTTTCGATGGAATTGCCTCTAATGTCAGAGAGTGTGTGAACAGTGTCATGACTGGCATAGAAATTGTAAGCTGTCGAGTTTCTGATGACTGCAAAAATTACGAGGATTGTGTCTCTAACATTTCACGCGAGCTTGAGATTGCAAAGGGGCATGTGAGGGATATGAATAAGGAAAAAGAGCAGCTAAAGAGAGACAAAAGCCAGTTATTGGAGCAACTGCAAGTTAAAAATGAAGAAGAAGTGGCTTTGAGGAAAACAGTTGAGAAGTTAGAGGCAAAGAGTAGCAAGGAGGAATCAGAGAAGATGAATCTGACAACAACTGTAGAACAACTAAAGAAGACAGTTAGTGGGCTGGAGAAAATGATGAAAGAGAAAGAGGACGGTATGTTGGACTTGGGAGAGGAGAAGAGGGAAGTCATCAGGCAGCTGTGTTTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTCAAGGACATTCTATCAAAGACTCGCGGTGGCCAGAGAGCAGCATAA 4107 0.4013 MVKHRLRDSIKSLFGSHIDPNKEELHVAKADIEDKVKEILKLIKDDNLEEDGTPVQLSKREPLVELIEDFHNQYQSLHAQYDNLTAELRKRIKGKRENGSSSSSSDSDSGSDYSSKDKGNKNGQLENEFQKTIDGLKQELEGVHAEVAELNRKLTISHEENAELSKQVDIAGKKEAELSQRLEELKIEKDSLIMDKETALQQIEEEKKITNGLKTLVDQLKDEKLALGKELEAVTGELSVLKQQLEHGEQKMTGISHNLEVAEEENKSLKEQLSQASNEVQLAQSRIQEFVAESSQLKEKLDESGREINAFTQMHEGFQKESSNRIGELEAQVTNLELELESLKNQKRDLEVQMKSSNTEARELGEHNSGLQNQISQLELKSKEREEELSAMVKKLEDNENESSLKISDLTSQINKLLTDIGTLHTQKNELEEEIIFKSNEASTQVENITNEANALKQEVTSLQHQKSDLEAQLEEKVHENSKNMIEMQTLKEEIDRKILEQERLLEDRENLAMQLKTLESEMNTIQNKNSEAEEQIRTKSHEISHMKQEMLELHEKIAEIEKISTDRESNLLILRDKFISTEQAVSAQIMASSEQIKNLEHDLASLQKEKQELEQQCEKLKLEVDSMQNQKSEVEEQMRTKNHENSGLREEVLGLQGTLAVLEKALAEKETELSSLQEKLHEKESEASGQITGFIAQIDNLKHDVVSLQNEKREVEQQCVNLKMELDSAQNQKVEVEEQLRTKDQEYTELREEKYGLQGTITALQKTLADKEAELSSLQEKLHEKESEASGQITALTVQIENLKHDLVSLQNEKQEVEQQCEKLKVELDSSQNQKGEVEEQIRAKDHVNTELKEEISGLQGTITALEKRLAEKESDLSILQENLHQKESEASAQISAFIVQIDDLKHNLVSLQNEKQELEHQCEKMKMEVDSTQNQKDEVEEQIRAKDHENTELREEILGLQGTIAALEKTLAEKESELSTLQQKLDEKESEASGQVTAFTAQIDDLQKDLLSLQKTKEELELQHEKISQEHAESLVMVENEKNDISSRSMDLTRTLEEREDSYQRLNEEYKQIDGLFQECVVKLEVAEKKIEEMAAEFHERIELKDQKVADLEHTIEDLRRDLEEKGDEISTLLENVRMLEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQRALEDRIAILSAIITANKEAFDGIASNVRECVNSVMTGIEIVSCRVSDDCKNYEDCVSNISRELEIAKGHVRDMNKEKEQLKRDKSQLLEQLQVKNEEEVALRKTVEKLEAKSSKEESEKMNLTTTVEQLKKTVSGLEKMMKEKEDGMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDILSKTRGGQRAA 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00488 1368 Coils Coil 794 842 - -
Viun3g00488 1368 MobiDBLite consensus disorder prediction 93 124 - -
Viun3g00488 1368 Coils Coil 1104 1145 - -
Viun3g00488 1368 Coils Coil 699 754 - -
Viun3g00488 1368 Coils Coil 762 789 - -
Viun3g00488 1368 Coils Coil 439 480 - -
Viun3g00488 1368 Coils Coil 1153 1173 - -
Viun3g00488 1368 Gene3D - 741 912 - -
Viun3g00488 1368 Gene3D - 575 719 - -
Viun3g00488 1368 Gene3D - 913 1051 - -
Viun3g00488 1368 Gene3D - 321 502 - -
Viun3g00488 1368 Gene3D - 225 320 - -
Viun3g00488 1368 Coils Coil 1242 1325 - -
Viun3g00488 1368 Coils Coil 319 434 - -
Viun3g00488 1368 Coils Coil 998 1035 - -
Viun3g00488 1368 Coils Coil 1051 1099 - -
Viun3g00488 1368 Coils Coil 896 993 - -
Viun3g00488 1368 Coils Coil 660 687 - -
Viun3g00488 1368 Coils Coil 850 891 - -
Viun3g00488 1368 PANTHER COP1-INTERACTIVE PROTEIN 1 711 828 - -
Viun3g00488 1368 Coils Coil 590 652 - -
Viun3g00488 1368 Coils Coil 67 87 - -
Viun3g00488 1368 Coils Coil 488 564 - -
Viun3g00488 1368 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 88 IPR011684 GO:0003779
Viun3g00488 1368 Coils Coil 133 307 - -
Viun3g00488 1368 SUPERFAMILY Tropomyosin 698 910 - -
Viun3g00488 1368 SUPERFAMILY Tropomyosin 923 1185 - -
Viun3g00488 1368 Pfam KIP1-like protein 14 82 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00488 Viun-Chr3 2884590 2891700 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00488 - - gmx:100778046 2031.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00488 3 2884590 2891700 Viun3g00488 3 2884590 2891700 ECH