Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00485 ATGACGGAACCACCAAAAGCCGATATCCATAACCGCCACGACGAGGATGCAGACGCCGGAGCTGCTTTCGTTCTCCAATCCAAAGGTCAGTGGTGGCACGCCGGATTCCACCTAACGACGGCGATCGTAGGACCAACTATTCTGACTCTGCCTTACGCGTTCCGAGGATTAGGGTGGGGACTTGGATTCTTAGGCCTAACGACGATGGGAGTGGTTACCTTCTACTCCTACTTCCTCATGTCCAAAGTTCTCGATTACTGTGAAAAATCTGGTCGCCGACACATCCGTTTCCGAGAGCTAGCCGCTGATGTTTTAGGGTCAGGATGGATGTTTTATTTTGTAATCTTTATTCAAACGGCAATCAACACTGGCGTTGGCGTTGGAGCAATCTTGCTTGCGGGTGAATGCCTTGAGATCATGTACTCCAATGTTTCAGTTCATGGATCCCTCAAATTGTACCACTTTATAGCAATGGTGACAGTGGTGATGATAGTTTTATCTCAGCTTCCTTCTTTCCATTCCCTGCGACACATCAACTTTTGTTCACTACTTTTCGCCCTTGGCTATACCCTCCTCGTGGTTGTTGCCTGTATTCATGCAGGTACGTCAAAAAATGCCCCTCCAAGGGACTATTCTTTAGAACCTAAGAAGTCTGCAAGGGCTTTCAGTGCCTTCACGTCCCTCTCCATACTTGCAGCAATATTTGGGAATGGCATATTACCCGAGATACAAGCAACTCTGGCTCCCCCTGCCACTGGGAAGATGGTAAAAGGCCTTATTATGTGTTACACAGCAATTTTTGTGACTTTCTACGCTGCAGCAGTTTCTGGATATTGGGTGTTTGGAAACAAATCCAGCTCAAACATTTTAAAGAGTCTGCTACCAGATAGTGGACCTTCTTTGGCCCCAACCTGGGTTCTTGCACTTGCAATCATCTTTGTTCTTCTTCAGCTCTTTGCCATTGGCCTCGTTTATTCTCAAGTTGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAGGCAGGGGATGTTTTCCAAAAGAAACCTCATTCCTCGGATCATTCTCAGAACAATTTACATGATATGCTGTGGGTTTTTGGCAGCCATGTTGCCGTTTTTTGGAGACATCAATGGTGTGGTTGGTGCTATTGGTTTCATCCCTTTGGATTTCATTCTGCCAATGCTTCTGTACAACATGACATACAAGCCTCCAAAATCATCCTTAACTTACTGGATCAACCTCTCAATTATAGTGGTGTTCACGGGTGTTGGAATCATGGGTGCATTCTCTTCCATAAGGAAATTGGTTCTTGATGCCAACCAGTTTAAGCTATTCAGCAGTGATGTTGTGGATTGA 1359 0.454 MTEPPKADIHNRHDEDADAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLGLTTMGVVTFYSYFLMSKVLDYCEKSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLEIMYSNVSVHGSLKLYHFIAMVTVVMIVLSQLPSFHSLRHINFCSLLFALGYTLLVVVACIHAGTSKNAPPRDYSLEPKKSARAFSAFTSLSILAAIFGNGILPEIQATLAPPATGKMVKGLIMCYTAIFVTFYAAAVSGYWVFGNKSSSNILKSLLPDSGPSLAPTWVLALAIIFVLLQLFAIGLVYSQVAYEIMEKKSADVRQGMFSKRNLIPRIILRTIYMICCGFLAAMLPFFGDINGVVGAIGFIPLDFILPMLLYNMTYKPPKSSLTYWINLSIIVVFTGVGIMGAFSSIRKLVLDANQFKLFSSDVVD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00485 452 Pfam Transmembrane amino acid transporter protein 28 433 IPR013057 -
Viun3g00485 452 PANTHER OS05G0424000 PROTEIN-RELATED 30 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00485 Viun-Chr3 2867056 2871707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00485 1 452 Organic Solute Cotransporters AT5G41800 78.761 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00485 - - gmx:100815232 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00485 3 2867056 2871707 Viun3g00485 3 2867056 2871707 ECH