Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00475 ATGAAGAGGGAAAGCGAGTTGGTTGGACTCTGCATAGAGGCAGCATGTGAGAGTAGAGAAAGCGTCGAAAAATGGCGGATGCAGAGGCGCAGTCTCGATCGCTTACCTTCTCCTGTCGCCGACGCTCTCCTCCGCCGCCTCATCGCCCGTCGTCTCCTCTACCCTTCCCTCCTCGAGGTTTTCAAACACAGCGCCGAAGAGGTTGACGTGAGGGACAACGGCTCCGTGGACGCGGAGTGGATGGCGTATTTGGGAGCTTTTCGTCACTTGCGCTACTTGAATCTCGCGGACTGTCATCGAATTACCACTTCAGCTCTTTGGCCAATTACAGGAATGACTACACTTCAGGAGTTGGATCTTTCTAGATGCTTCAAGGTCAATGATTCCGGGATCAGCCATCTTCTCTCCGTTCCTAATCTGGAGAAGCTGCGTATTTCAGAAACTGGCGTCACTGCCAAAGGAGTCAAGCTTCTTGCCTCTCTTCAAAACTTGTCTCTTCTTGACTTAGGTGGCTTGCCCGTAGATGACGTGTCGTTAACTTCGTTACAGGTACTGAAAAGGCTACAATATATTGATCTTTGGGGTAGTAAAATATCAAATAAAGGTGCAGCTGTTCTCAATATGTTCCCAAAGTTGACCCATCTAAATCTTGCTTGGACTAGTGTCACAAAGTTGCCTACACTATCATCTCTTGAATTCCTGGACATGAGCAACTGTACTATTGATTCTATACTTGAAGACGATAAATCTCCTTTGGTAAAGCTTATTTTCTCTGGGGCTACATTCCTGAATGAAGCTGGAGCCTTCTCGTATGCAAATACAAATCTGGTATCCTTTTTGGATGTAGCCCATACCAGCCTGCATAAATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACACCTCAATCTCAGCTCATGCATGATGGGGGACGATTCAGTTGAGATGGTTGCATGTATTGGTGGTAATTTGAAAAGTCTGAATCTAAGTGGTACCAGGGTTAGTTCTGCTGGATTAGGAATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTATCATTATCTAAGACACCAGTGGATGACACTGGCATCTCATTTATCAGTATGATGCCTTCATTAAAGGATGTTGACCTGAGCAATACAAACATTAAAGGTTTTCTACACCAAGGAAAGGTTGATGTGGACTCCTCACTATCCCTGATGGCTTTGCAAAATCTTAAATTAGAAAGGTTGAATTTGGAGCATACGCAAGTTAGGGATGAAGCTTTATACCCCTTGTCAAGCTTACTAGAGCTGAGATATCTATCACTTAAAAGTGCTTCACTTGCAGACGTCTCACTTTACTATTTATCGTCAATTCCAAAATTGACAAATCTTAGTGTTTGTGATGCGGTATTGACAAATTATGGGATTGATATATTTAAGGCTCCTGAAACCCTGAAACTGTTGGACCTCAGAGGTTGTTGGCTCTTAACTGAAGACAGTATCTTGTCATTCTGTAGACATCATCCACAAGTTGAAGTCCTACATGAACTTGGTACTGTATATCCTTTTAATCAAAATGGTCCTAATCATTCCTCTCCATCACGATCAACTTCTAGGACTGTGCAAATGGCTAAGAAGAAAGATCCAGTTCCGGTATTACCATATCTTGCAGATCAAAGATTAAAGTATAGCAGGGATGAGTTACTTGCATTGCAGTTTGCATCCTTCCCTCTTGCATCTAGTAGTGAGAGTGGGAATTCAATATTTGAGAAACAATTGGACTGA 1770 0.4266 MKRESELVGLCIEAACESRESVEKWRMQRRSLDRLPSPVADALLRRLIARRLLYPSLLEVFKHSAEEVDVRDNGSVDAEWMAYLGAFRHLRYLNLADCHRITTSALWPITGMTTLQELDLSRCFKVNDSGISHLLSVPNLEKLRISETGVTAKGVKLLASLQNLSLLDLGGLPVDDVSLTSLQVLKRLQYIDLWGSKISNKGAAVLNMFPKLTHLNLAWTSVTKLPTLSSLEFLDMSNCTIDSILEDDKSPLVKLIFSGATFLNEAGAFSYANTNLVSFLDVAHTSLHKFFFLSKMKVIEHLNLSSCMMGDDSVEMVACIGGNLKSLNLSGTRVSSAGLGILAGHVPNLEILSLSKTPVDDTGISFISMMPSLKDVDLSNTNIKGFLHQGKVDVDSSLSLMALQNLKLERLNLEHTQVRDEALYPLSSLLELRYLSLKSASLADVSLYYLSSIPKLTNLSVCDAVLTNYGIDIFKAPETLKLLDLRGCWLLTEDSILSFCRHHPQVEVLHELGTVYPFNQNGPNHSSPSRSTSRTVQMAKKKDPVPVLPYLADQRLKYSRDELLALQFASFPLASSSESGNSIFEKQLD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00475 589 Gene3D Ribonuclease Inhibitor 54 224 IPR032675 -
Viun3g00475 589 Gene3D Ribonuclease Inhibitor 225 388 IPR032675 -
Viun3g00475 589 SUPERFAMILY RNI-like 405 505 - -
Viun3g00475 589 Gene3D Ribonuclease Inhibitor 389 515 IPR032675 -
Viun3g00475 589 MobiDBLite consensus disorder prediction 520 535 - -
Viun3g00475 589 MobiDBLite consensus disorder prediction 520 541 - -
Viun3g00475 589 SMART LRR_CC_2 161 185 IPR006553 -
Viun3g00475 589 SMART LRR_CC_2 477 502 IPR006553 -
Viun3g00475 589 SMART LRR_CC_2 87 112 IPR006553 -
Viun3g00475 589 SMART LRR_CC_2 429 453 IPR006553 -
Viun3g00475 589 SMART LRR_CC_2 321 345 IPR006553 -
Viun3g00475 589 SMART LRR_CC_2 113 137 IPR006553 -
Viun3g00475 589 PANTHER - 296 461 - -
Viun3g00475 589 Pfam Leucine Rich repeat 88 102 IPR001611 GO:0005515
Viun3g00475 589 Pfam Leucine Rich repeat 404 426 IPR001611 GO:0005515
Viun3g00475 589 Pfam Leucine Rich repeat 113 134 IPR001611 GO:0005515
Viun3g00475 589 SUPERFAMILY RNI-like 68 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00475 Viun-Chr3 2804962 2811136 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00475 - - gmx:100814174 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00475 3 2804962 2811136 Viun3g00475 3 2804962 2811136 ECH