Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00462 ATGCTTTCTGACGTTTCTGCTATGACTCTAAATCTCTGCACTCCATGCTTCTCTCGCGTACTCCATCACCCTTCTTCTTCTCTCCCCAAACTCTCCGAAACCTGCGTCAACCACGCCGCCAACACCAACTCGCCTTCTCCCTCTCTATTTTTCACCACTCCCTCTCTTTCCAACCTTTCGCGATTCCTTAATTCCAAAGCCTCCGTCAGCGAGAGCCACAATGAAACCTCCGACGATACCGCCAACATACTCGACCAACAGCTCCTCCTCCAAGTCGCTGCCAACGCCAAAGACGCCGACGAGGCCTTGCAGATTATCGCCGACAATTCCTCCCGGAACGGCGGCTTCGTTTCCACCTCTGACTGCTGCTCCGTCATATCCGCTGCGCTTAACCGCAACAATCCTGAACTCGCTCTTTCCATCTTCTACGCCATGCGCGCCAGTTTACATCCAGTTGACGATAGTGGCCCTCTGGCTGCGAGATGGAAGTGGTCGCGGCCAAATGCAAATGTTTATGCACTGTTGATTCAGGGTTTAGCGGCGGTGTTAAGGGTTTCTGACGCTCTTAGAGTGATTAAGTATATTTGTGAGGTCGGCGTTTCACCTGGTGAGGAGGTACGTTTTGGGAAGGTAGTGAAATGTCCTAGTTGTCGGATTGCTGTTGGTGTTGCACAGCCACAACAAGGTATTCAGATAGTATCATGTTCCAAGTGTCGCTACCAATACGAACTTGTTTCAGGTGACATAGTCAGTATTGAATCAGAAGAAATCAGCATGGACATATCGGCGTGGGAAAGGGGGTTAAGATACGTGAAACTGAGGAAGCAAAACATTCCCTCTGCTGTTCACTCTATTGTGGTGCGGACCCCTTCTGGTATGGCTCGCACTCATAGATTTGCAACTGAAACAGTTGATCTGCCAGCCCAAGAAGGAGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGTATATAGAAAGGTGGGCCCCTTTAAATTCAGTCCAAGGAACCCTGATTTCTATCCCGGGGAAGCTATGTGCATAACAAAGCACAAAGATGGGCGGGAATCACTACTGTTAAGAGCCCCAAGAAAAGAAAATTCATCATTGCTGAAACCCTCATTCCTTTTTCCACTTATCGCTTTGTTGGCCACCGGGGATGCTGCCTCTGGACTTATTGACCCTGGCCTTCCCCAGTTACTATCAGTTGTTGCAGTTTCAACCCTTGTTGTTGGGTCTACGTTGAACACCGTTGTTCTTCCCCAGTTTAATCAGCTTCCACAGAAGTCAGTAGATGCAGTTGCGATCAAGCAACGACTATTATCTCAATATGATGTTCTTCTGTCTCGCATCAATGACCTCAAAGAAGCAGCTGAAAAAGAGATTTGGATGCTAGCTCGAATGTGCCAACTTGAGAACAAAATTTCAGCTGTTGGAGAACCTGCTTATCGGAATCGGAGAAGTAAAGTCAAGAGGGTGCGAGAGAGTCTGCAAAACTCCCTTAGAGGACGGATTGAACTGATTGACAGCTATGCTAGGATTTCCTCAATGATTGAAATCGAAGTGGAGATGGAGACTGATGTTCTTGCTGCTGAAACTGCTAGTAATATGGACAGTATCTCAGAACAGATAGAACAAATCATGGAGCTTGAAAATTTGGAGGAGGGATGGAAAATTCAAGCAGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCCCAGCCCATGCCTCTGGACGAAGTTTGA 1746 0.4754 MLSDVSAMTLNLCTPCFSRVLHHPSSSLPKLSETCVNHAANTNSPSPSLFFTTPSLSNLSRFLNSKASVSESHNETSDDTANILDQQLLLQVAANAKDADEALQIIADNSSRNGGFVSTSDCCSVISAALNRNNPELALSIFYAMRASLHPVDDSGPLAARWKWSRPNANVYALLIQGLAAVLRVSDALRVIKYICEVGVSPGEEVRFGKVVKCPSCRIAVGVAQPQQGIQIVSCSKCRYQYELVSGDIVSIESEEISMDISAWERGLRYVKLRKQNIPSAVHSIVVRTPSGMARTHRFATETVDLPAQEGERVTVAVAAPSNVYRKVGPFKFSPRNPDFYPGEAMCITKHKDGRESLLLRAPRKENSSLLKPSFLFPLIALLATGDAASGLIDPGLPQLLSVVAVSTLVVGSTLNTVVLPQFNQLPQKSVDAVAIKQRLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPAYRNRRSKVKRVRESLQNSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNMDSISEQIEQIMELENLEEGWKIQAEANDEAERLLSSQPMPLDEV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00462 581 Coils Coil 437 457 - -
Viun3g00462 581 Gene3D Tetratricopeptide repeat domain 59 209 IPR011990 GO:0005515
Viun3g00462 581 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 8 580 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00462 - - gmx:100781803 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00462 3 2762649 2768576 Viun3g00462 3 2762649 2768576 ECH