LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun3g00459	ATGGAGAATCTCATTTCTTTGGTGAACAAAATCCAGAGAGCTTGCACCGCCTTAGGTGACCACGGCGAAAACACTGCACTCCCCACACTGTGGGACTCTCTTCCCGCCATCGCCGTTGTCGGAGGCCAGAGCTCAGGAAAGTCCTCCGTCTTGGAGAGCGTGGTCGGCAAAGATTTCTTACCTCGTGGATCAGGGATTGTTACGCGGCGACCGCTGGTTTTGCAGCTTCACAAGATTGAAGAGGGAAGCAGAGAGTACGCTGAGTTCCTGCACCTCCCGAGGAAGAGGTTCACCGATTTTGTTGCTGTGAGGAAGGAGATTCAAGATGAAACTGATAGAGAGACTGGACGAACCAAACAAATTTCTAGTGTTCCGATTCATCTTAGTATATACTCACCTAATGTTGTTAACTTGACGCTCATTGATCTTCCCGGGCTTACTAAAGTAGCTGTAGAGGGGCAACCGGACAGTATTGTGAAAGACATCGAGGATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTGGCTATCTCACCAGCCAATCAAGATCTCGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACCGGGGAGAGGACCATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGATATGTTGGAAGGAAGAGCATATAGGTTAAAGTTTCCCTGGATTGGTGTCGTGAATAGATCCCAACAAGACATAAACAAGAATGTTGACATGATTGCTGCTAGACGTAGAGAACGTGAGTACTTCAATAGTACCCCTGAATATAAACACCTTGCACACAGAATGGGTTCTGAGCATCTGGCAAAGATGCTCTCAAAGCACTTGGAAACAGTAATCAAGTCCAAAATTCCTGGCATTCAATCTCTTATTAACAAAACAATAGCCGAACTTGAAGCTGAACTAACTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGGCAAGTTGTACTCAATCATGGAAATATGCCGCTCATTTGATCAAATATTTAAAGATCATCTTGATGGCGTGCGGCCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCGATGGAAAATATAAGGAAGCTTATTACTGAAGCTGATGGGTACCAGCCTCATCTAATAGCTCCAGAACAAGGATATCGCCGTCTCATTGAATCTTCTCTAATAACTATAAGGGGCCCTGCTGAGGCAGCTGTTGATGCTGTTCATGCCCTGTTAAAGGACCTGGTTCACAAAGCTATCAGTGAGACTGTGTGA	1338	0.4477	MENLISLVNKIQRACTALGDHGENTALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQQDINKNVDMIAARRREREYFNSTPEYKHLAHRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYSIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHALLKDLVHKAISETV	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun3g00459	445	ProSitePatterns	Dynamin-type guanine nucleotide-binding (G) domain signature.	60	69	IPR019762	-
	Viun3g00459	445	Pfam	Dynamin central region	221	442	IPR000375	-
	Viun3g00459	445	Gene3D	Dynamin, middle domain	326	445	-	-
	Viun3g00459	445	ProSiteProfiles	Dynamin-type guanine nucleotide-binding (G) domain profile.	31	300	IPR030381	GO:0005525
	Viun3g00459	445	Gene3D	-	1	309	IPR027417	-
	Viun3g00459	445	FunFam	dynamin-related protein 1E	1	309	-	-
	Viun3g00459	445	CDD	DLP_1	33	300	IPR001401	GO:0003924\|GO:0005525
	Viun3g00459	445	Pfam	Dynamin family	37	213	IPR045063	-
	Viun3g00459	445	SMART	dynamin_3	1	251	IPR001401	GO:0003924\|GO:0005525
	Viun3g00459	445	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	23	308	IPR027417	-
	Viun3g00459	445	PRINTS	Dynamin signature	201	217	IPR022812	-
	Viun3g00459	445	PRINTS	Dynamin signature	224	243	IPR022812	-
	Viun3g00459	445	PRINTS	Dynamin signature	132	149	IPR022812	-
	Viun3g00459	445	PRINTS	Dynamin signature	34	52	IPR022812	-
	Viun3g00459	445	PRINTS	Dynamin signature	182	200	IPR022812	-
	Viun3g00459	445	PRINTS	Dynamin signature	59	76	IPR022812	-
	Viun3g00459	445	PANTHER	DYNAMIN	2	441	IPR022812	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun3g00459	Viun-Chr3	2731811	2738343	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun3g00459	-		-	gmx:100037461	855.899

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun2g02682	2	32331374	32337313	Viun3g00459	3	2731811	2738343	PCT