Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00438 ATGGGGTGTGCTTCCTCTAAGGGTGTGGATGTGGCGGCGGTCCCTTACCGGCCGGCGCCGACGAGCTTCGCGGTGTTCGACATAAACGCGATCGAGGAGCCATGGCTGAAGCACCTGAACGAGAGCACCACCCAAGTCCACCAAGACAAAACCCCTCTCCCGGCCCCTATCCTCCACAAACTCAACATGCTCGACGCCACCGACGCTCCTCAATCATGGGACGAGGTCAGCAAAACACTCCAAGACCTCAAACCCGTCATCACCAAACCACCACAAACCTCACCACCCCAACCACCCCCACAACAACCTCAACCTCAACCTCCGCAAAAAACTAACTCCTTCCACACACTCGAAGAGTTAGACGCCAAGACAAAGCCCAAGCCCGAACCAACAAAGCCCGACTCAGTAAAGCCCGAAGCAGTAAAGCCCGCTGTGGCTGTCGTGAACGTGGCGCGAGGGAGCAAGTTGAAGGACAACGTGTTCATAATGCGGGACAGGATGGAGAGAGAGAAGGAGGAGAAGGAGTCGGCGTTCGAGCGGCTGCGGCGGGATCCGCTGAGCGCGTTTCCGGAGAAGTGTCCGCCGGGGGGGAGCGAGACGGTGGTGGTGTACACGACGTCGTTGCGGGGCGTGAGGAAGACGTTCGAGGACTGCAACAGGGTGCGCGACGTGCTGGAGACGCACCGCGTGGTGTTCGACGAGCGCGACGTGTCGTTGCACGGGGAGTTTCTCCGGGAGGTGAAGGAGCTGGTGGGCGAGGCGGTGGCCCTGCCGCGGGTGTTCGTGAAGGGGAGGTACGTCGGGGGTTTGGAGGAGTTGGTGGAGCTGAACGAGACGGGTCGACTCGGGAGGATACTGAGAGCCACACGTGTGGAGAGGGGGATTGGGAGGCAAACGTGTGGAGGATGTGGTGGGGCCCGCTTTGTGCCTTGTTTGGATTGTGGTGGGAGTTGCAAGATTGTTGTGGATGGAGTTGAGAAACAGAGGTGTCCCAAGTGTAATGAGAATGGCTTGGTTCATTGCCCTTCTTGCATTTGA 1038 0.5925 MGCASSKGVDVAAVPYRPAPTSFAVFDINAIEEPWLKHLNESTTQVHQDKTPLPAPILHKLNMLDATDAPQSWDEVSKTLQDLKPVITKPPQTSPPQPPPQQPQPQPPQKTNSFHTLEELDAKTKPKPEPTKPDSVKPEAVKPAVAVVNVARGSKLKDNVFIMRDRMEREKEEKESAFERLRRDPLSAFPEKCPPGGSETVVVYTTSLRGVRKTFEDCNRVRDVLETHRVVFDERDVSLHGEFLREVKELVGEAVALPRVFVKGRYVGGLEELVELNETGRLGRILRATRVERGIGRQTCGGCGGARFVPCLDCGGSCKIVVDGVEKQRCPKCNENGLVHCPSCI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00438 345 FunFam Glutaredoxin family protein 198 294 - -
Viun3g00438 345 Pfam Glutaredoxin 201 267 IPR002109 -
Viun3g00438 345 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 116 344 - -
Viun3g00438 345 CDD GRX_GRX_like 201 341 - -
Viun3g00438 345 Coils Coil 164 184 - -
Viun3g00438 345 ProSiteProfiles Glutaredoxin domain profile. 189 293 - -
Viun3g00438 345 SUPERFAMILY Thioredoxin-like 194 286 IPR036249 -
Viun3g00438 345 MobiDBLite consensus disorder prediction 89 107 - -
Viun3g00438 345 MobiDBLite consensus disorder prediction 86 112 - -
Viun3g00438 345 Gene3D Glutaredoxin 199 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00438 Viun-Chr3 2649763 2651237 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00438 K17479 - gmx:100809536 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00438 3 2649763 2651237 Viun3g00438 3 2649763 2651237 ECH