Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00230 ATGAACATTTGTAGTTTCTGGGTATCTTCCATGAAAATCCCCTTTCACGGGTGTCGATTCTCAAGGCCTTTCTTCTCTCTATCTTCTCCGTCTCGCAATCGCATTATGACCATTCAAAGTTCTTCTTCTTCGTCTGCTTCCATATCAACGGAGTCCAAAGAGAAGAAGAAGGAAAATTTACCTTGGTTGATCGTTGGCCTCGGCAATCCAGGCAAAAAGTACGCTGCCACTCGTCACAATGTGGGCTTTGAAATGGTTGATGCCATAGCTGAAGCTGAAGGGATATCTATGAACACTGTTTCCTTCAAAGCTTTATTTGGGAAAGGTTTAATAGGTGATGTCCCAGTCATACTTGCAAAACCACAGACTTTTATGAATTCTAGCGGTGAATCTGTTGGGGCCATAGTTTCGTACTACAAGATTCCACTAAAGCAAGTACTCGTGATCTTTGATGACTTGGATTTACCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGCCACAATGGAATGAAGAGTGTTATTAATCATTTCAAAGGGAATAATGGTTTTCCTCGCTTAAGAATTGGCATCGGACGACCTCCCGGTAAAATGGATCCTGTAGCATTTGTTCTTCGCACGTTCACTAAACAGGAAAGAGAAGAGTTGAATTTTACATTACAAGATGGAATAGAAGCTCTTCGGATTCTTTTGCTGGAAGGATTTGATAAAAGTGCAACATTTGTTAACAGTGCCAAAAAGATAGAGCAAACTGGTTGA 768 0.4128 MNICSFWVSSMKIPFHGCRFSRPFFSLSSPSRNRIMTIQSSSSSSASISTESKEKKKENLPWLIVGLGNPGKKYAATRHNVGFEMVDAIAEAEGISMNTVSFKALFGKGLIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNNGFPRLRIGIGRPPGKMDPVAFVLRTFTKQEREELNFTLQDGIEALRILLLEGFDKSATFVNSAKKIEQTG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00230 255 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 167 177 IPR018171 GO:0004045
Viun3g00230 255 Gene3D - 46 249 IPR036416 GO:0004045
Viun3g00230 255 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 74 87 IPR018171 GO:0004045
Viun3g00230 255 Pfam Peptidyl-tRNA hydrolase 63 241 IPR001328 GO:0004045
Viun3g00230 255 NCBIfam aminoacyl-tRNA hydrolase 62 231 IPR001328 GO:0004045
Viun3g00230 255 SUPERFAMILY Peptidyl-tRNA hydrolase-like 61 246 IPR036416 GO:0004045
Viun3g00230 255 Hamap Peptidyl-tRNA hydrolase [pth]. 61 239 IPR001328 GO:0004045
Viun3g00230 255 PANTHER PEPTIDYL-TRNA HYDROLASE 51 246 IPR001328 GO:0004045
Viun3g00230 255 FunFam Peptidyl-tRNA hydrolase 59 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00230 Viun-Chr3 1335973 1339484 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00230 K01056 - gmx:100526866 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00230 3 1335973 1339484 Viun3g00230 3 1335973 1339484 ECH