Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00176 ATGTCTCTACCAACCTCACAAGATGCACAACCACCGTACAACGAGGCCGCTGCCACCGGTTTTCCGGCGGCTTACAACCCCAAAGCCCCGGCCAAGGTTGAATGGTCCACCGGCCTCTGTGATTGCTTCTCCAACTTCAAAAACTGCTGCATAACGTGCTTGTGTCCATGCATCACGTTTGGTCAGATTGCAGAGATTGTTGACAAGGGATCAACGTCATGTGGTGCTAGTGGGGCATTGTATGCACTGGTTTCTTGTTTACTTGGTTGTGGTTGCGTATACTCATGCTTCTACCGCAGCAAGATGAGAAGACAATACATGTTGAAGGAGGCTCCATGTTGGGATTTCTTTGTTCATTGCTGCTGTGAAACCTGTGCCTTGTGCCAAGAATATCGTGAACTTCAAAACCGTGGATTTGACATGACCATTGGGTGGGAGGGAAATGTTGAGCGAGGGAACCATGGTGTAAGCAAGGTACCAACTGCTCCAGCAGTTCAACCTATGACTCGTTGA 513 0.4912 MSLPTSQDAQPPYNEAAATGFPAAYNPKAPAKVEWSTGLCDCFSNFKNCCITCLCPCITFGQIAEIVDKGSTSCGASGALYALVSCLLGCGCVYSCFYRSKMRRQYMLKEAPCWDFFVHCCCETCALCQEYRELQNRGFDMTIGWEGNVERGNHGVSKVPTAPAVQPMTR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00176 170 NCBIfam uncharacterized Cys-rich domain 34 136 IPR006461 -
Viun3g00176 170 PANTHER DUF614 FAMILY PROTEIN-RELATED 31 143 IPR006461 -
Viun3g00176 170 Pfam PLAC8 family 35 133 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00176 Viun-Chr3 931481 932595 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00176 - - gmx:100818949 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00176 3 931481 932595 Viun3g00176 3 931481 932595 ECH