Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00175 ATGGCGGAGGAGGAGCTAGAAAGAAGAAGCAACTTCCTTAAAGGGTTGATACAGAAGAAGAAAGCCATAGAACAACAAGAGCAGCATGATCATCTACAACACAATAACGTTCGTGTCAGAGCTTCTGACATGCCTCTCCCTCTTCAGAATGCTGCCTTTCGTTGTGCACGTCATCTTCTCGATTCAATGCCACCGAAGAAGCTTGATAGCAAACGCCTAGCCCTCGCACTTAAGAAGGAATTTGATTCTTCGTATGGTCCAGCATGGCACTGCATTGTGGGCACTAGTTTTGGGTCCTATGTTACTCACTCTGTTGGTGGTTTCTTGTATTTTTCGATCGACAAAGTTTATATCCTTCTCTTCAAGACCGCAGTTGAACCATTAGACCATTCATAA 396 0.4419 MAEEELERRSNFLKGLIQKKKAIEQQEQHDHLQHNNVRVRASDMPLPLQNAAFRCARHLLDSMPPKKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVYILLFKTAVEPLDHS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00175 131 SUPERFAMILY DLC 32 123 IPR037177 GO:0007017|GO:0030286
Viun3g00175 131 FunFam Dynein light chain 26 124 - -
Viun3g00175 131 PANTHER DYNEIN LIGHT CHAIN 34 123 IPR001372 GO:0007017|GO:0030286
Viun3g00175 131 Pfam Dynein light chain type 1 37 123 IPR001372 GO:0007017|GO:0030286
Viun3g00175 131 CDD DLC-like_DYNLL1_DYNLL2 36 123 - -
Viun3g00175 131 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 22 124 IPR037177 GO:0007017|GO:0030286
Viun3g00175 131 SMART Dynein_light_2 32 123 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00175 Viun-Chr3 927020 928644 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00175 K10418 - gmx:100805980 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00175 3 927020 928644 Viun3g00175 3 927020 928644 ECH