Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00160 ATGGCGTGCTTGGTATCTCGCTCGGGAAGGGAATTGCAGAGGTACAACAACATGGGTGGCCGCCAAGTTGTTGGGTGCATACCTTACAGATATAAACAAGACGTAGATGGTAACATCAGTGACGAATTGGAAGTACTTGTCGTTAGTTCTCAGAAAGGCCAAGGATTGATGTTCCCTAAGGGAGGATGGGAACTTGATGAATCTGTGGAAGAAGCAGCTTGTAGGGAATCTCTTGAAGAAGCAGGAGTATTGGGAATTATTGAGCATGAATTGGGGCAGTGGTATTTCATCAGCAAAAGACATGGCATATATTATGAAGGGCACATGTTCCCCATGTTTGTCAAGGAACAGCTTGACACGTGGCCAGAGAAAAATTTACGGAGAAGAATTTGGATGACTGTTGGTGAAGCAAGAGAAGTTTGTCAGCATTGGTGGATGAAGGAGGCATTAGATATATTGGTTAAAAGAATAAGGGTGTCTTCAGAACAAGGAAAAAAAGATATGGTTTTGGATGATTCTTTAGGGTTTTAA 531 0.4237 MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKQDVDGNISDELEVLVVSSQKGQGLMFPKGGWELDESVEEAACRESLEEAGVLGIIEHELGQWYFISKRHGIYYEGHMFPMFVKEQLDTWPEKNLRRRIWMTVGEAREVCQHWWMKEALDILVKRIRVSSEQGKKDMVLDDSLGF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00160 176 Pfam NUDIX domain 42 139 IPR000086 -
Viun3g00160 176 SUPERFAMILY Nudix 14 156 IPR015797 -
Viun3g00160 176 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Viun3g00160 176 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Viun3g00160 176 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 157 - -
Viun3g00160 176 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
Viun3g00160 176 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Viun3g00160 176 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00160 Viun-Chr3 848805 850362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00160 K07766 - gmx:100800108 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00160 3 848805 850362 Viun3g00160 3 848805 850362 ECH