Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02972 ATGTCGATTTCGGGCATCCAGGGGCAGCCTCTTGAGGTTACGGTGGTGTCCTGCTCCAAGCTGAAGGACACAGAATGGATTTCACGGCAAGATCCCTACGTTTGCATTGAGTATGGCAGCACCAAGTTCCGCACCAGAACCTGCACCGACGGCGGTAAGAACCCCGTCTTTCAGGAGAAGTTCGTCTTTCCCCTCATCGAAGGCCTTCGGGAGATCAACGTCCTTGTTTGGAACAGCAACACTCTCACCTTCGACGATTTCATCGGAAGCGGAAAGATTCAGCTGCACAAGGTTCTCTCTCAAGGCTTCGACGACTCCGCTTGGCCACTTCAGACCAAATCTGGCAGACATTCTGGTGAAGTCAAAGTCATACTGCACTATGCAATTGCAAATCAAAGGCAGAAATCAGGGTCAGGCCATGCTACATCTGAACCTCCCTATGTGCCAACACCAACTCCTCCATTCCCTTCACATTCTAATCCTTATCCTGCATCCTCCTACCCACCACCTCCTCATTCTACTTCCTCCTATCCACCACATCCTTCTGCTACTGCTTACCATACAACTGGATCATACCCACAAGTGGCATCCACACCCTCATACCCACCTCCTCCCACAGCTTACCCACCCCATCCCTCACATTCATCTCCCTATCCACAGCACTCCTACTCTGCATCAGCTCCCTATCCACCCTCCTCCTATCCCCCTCCACAATCCTATCCGCCTGTTTCAGCTTATCCACCATCTTCGTATCCACCGCCAGCAGGGATATACCCTCCACCGCCATACTGA 792 0.5215 MSISGIQGQPLEVTVVSCSKLKDTEWISRQDPYVCIEYGSTKFRTRTCTDGGKNPVFQEKFVFPLIEGLREINVLVWNSNTLTFDDFIGSGKIQLHKVLSQGFDDSAWPLQTKSGRHSGEVKVILHYAIANQRQKSGSGHATSEPPYVPTPTPPFPSHSNPYPASSYPPPPHSTSSYPPHPSATAYHTTGSYPQVASTPSYPPPPTAYPPHPSHSSPYPQHSYSASAPYPPSSYPPPQSYPPVSAYPPSSYPPPAGIYPPPPY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02972 263 MobiDBLite consensus disorder prediction 146 177 - -
Viun2g02972 263 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 127 IPR035892 -
Viun2g02972 263 MobiDBLite consensus disorder prediction 197 216 - -
Viun2g02972 263 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Viun2g02972 263 CDD C2 11 108 - -
Viun2g02972 263 MobiDBLite consensus disorder prediction 133 246 - -
Viun2g02972 263 Pfam C2 domain 11 101 IPR000008 -
Viun2g02972 263 MobiDBLite consensus disorder prediction 229 246 - -
Viun2g02972 263 Gene3D C2 domain 9 128 IPR035892 -
Viun2g02972 263 SMART C2_3c 10 107 IPR000008 -
Viun2g02972 263 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 4 262 - -
Viun2g02972 263 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02972 Viun-Chr2 33748279 33750261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02972 - - vra:106777522 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02972 2 33748279 33750261 Viun2g02972 2 33748279 33750261 ECH