Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02968 ATGATTTTCAAATTTAAATTTGGACTCGTTGTGATTTGCTTTGTTAAGAAAGGAAAAACAAAGAGAAGAGGGTGTAAATTGAAACCTGTGATGAGATTGGCGATGGCGGCACAAACAGAATGGATGTTCAGAGCGTTGAGCAGTGGTCGGCGGCACTTGTCGGCGGGAAGGCAGTGGGAGGAGAAATGGCTTACGCTGCCTCCCGTGGCTGCGAGCGCCACCGTGGAGGTGAAGGGAAAGAGAAAGGGAACAGGAAACGAACTCTCCTCCACTCCCACCACCGCGCTCAAATGGATTGTTCGCTGCTGCCCAAACCTCCCCGTGTCCCTTCTGCACAAGCTTTTCCGTCTGAGACAAGTTCGACTTCTCTGTCCTCCTGACATGGACACGCAACATCAAACACTCAAAAGGGTGGCAGCTAAGTACACCTTGAACGCTGGAGATCGGATTTTACTTCCTCAATCTGTTCAACAAAAACCAGCGCCTACACACAAACCTCACTCTCCTCTCACTCCTCAGCAAATTAACTTTATCCGCACTCTTGTTATATACAAGGATCCTGCCATTCTCGTCCTCAACAAACCTCCAGGAATGCCCGTGCAGGGTGGCATTAATATCAAACACAGTTTAGATGTGGTAGCTGCTGCATGTTTAAATTATGAATACTCTGAACCCCCTCGTCTGGTGCATAGACTAGACAGAGACTGTTCTGGCATTCTGGTGATGGGAAGAACACAGACAAGTACTACAGTTCTGCATTCCATCTTTCGGGAGAAAACATCTAGGGCTTTAGATAATATTGGCGAAGAGAAGAGAATACTACAGAGAAGGTATTGGGCACTTGTCCTTGGATGTCCTAGACGTTCAAAGGGATTGGTCACTGCTTCACTGGGTAAGGTGGTAGTTGACAACGGGAAATCTGATCGAATAACTGTAGTTGACAATTCAGCATCATTGTCATCACAGCATGCAATTACAGAGTACCGAGTGCTTGCATCATCATCACAAGGTTACACATGGTTGGAGTTGTCCCCTTTAACTGGTAGAAAACACCAGCTTCGAGTGCACTGTGCTGAGGTTTTAGGTACACCAATAGTTGGGGACTACAAGTATGGATGGCAAGCTCACAGGAAGTGGGGAGGTTTTGATTTGTCTAATGTGGAGGACTCCTGTGAAGAGCTTCTCAAGGAAGAAACACTCCCCTTTGGCCTTAATTTGAACAATGGGAGCATCTCTGAGAATCATCCTCGTTTACATCTTCATTGCAAGCAAATAGTCTTACCCAATATATCTCAAGCACTGCAAAATGTGCAATCATTTTCCAATTGTGATCTTTCACTAGTGGAAGGACTTGAGTTGGTAGCGGATTTGCCTCCATATATGCAAAGAAGTTGGGATGTCACAAATGGTTGA 1413 0.4586 MIFKFKFGLVVICFVKKGKTKRRGCKLKPVMRLAMAAQTEWMFRALSSGRRHLSAGRQWEEKWLTLPPVAASATVEVKGKRKGTGNELSSTPTTALKWIVRCCPNLPVSLLHKLFRLRQVRLLCPPDMDTQHQTLKRVAAKYTLNAGDRILLPQSVQQKPAPTHKPHSPLTPQQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKHSLDVVAAACLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDNIGEEKRILQRRYWALVLGCPRRSKGLVTASLGKVVVDNGKSDRITVVDNSASLSSQHAITEYRVLASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGGFDLSNVEDSCEELLKEETLPFGLNLNNGSISENHPRLHLHCKQIVLPNISQALQNVQSFSNCDLSLVEGLELVADLPPYMQRSWDVTNG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02968 470 CDD PseudoU_synth_RluA_like 189 380 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Viun2g02968 470 Gene3D Pseudouridine synthase 173 439 - -
Viun2g02968 470 Pfam RNA pseudouridylate synthase 189 358 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Viun2g02968 470 SUPERFAMILY Pseudouridine synthase 177 429 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Viun2g02968 470 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 75 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02968 Viun-Chr2 33729059 33733421 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02968 - - gmx:100779473 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02968 2 33729059 33733421 Viun2g02968 2 33729059 33733421 ECH