Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02947 ATGGCTTCCTCTTCTTCTGCGCCGGAAGGTGAAGGTGAAGGTAGAGGTAGAGGTTTAGGGTTATCGGAAGAAGAATACGACCTTATCTATGGCTCTGAATCCGGATGGGTGGAGGCTCGATCTTCTTGCGATCATCTCTCCTCCTTATCCGCCGATCTCAGCCACATTCCGCCTCCGGACACACCCTGCCACACCTGTCAACACCCCTCCGAAAACTGGCTCTGCCTCTCCTGCAAGGAAGTCCTCTGTGGCCGTTTCGTGAACAAGCACATGCTCCACCACTTCCACCACACCAATCACTCTCTCGCCCTCAGTTTCAGTGATCTCTCCTTCTGGTGTTTCTCCTGCGACGCTTACTTGGATGCCCAACTCATCCCCCAACTGCGCCCTATTCATCAACTAGCTTATGTAATGAAATTCGGTGAGTCTCCACCACTCCCACTTATTCAACAACATCAACCTTCCTCTGCCCGTTAA 477 0.522 MASSSSAPEGEGEGRGRGLGLSEEEYDLIYGSESGWVEARSSCDHLSSLSADLSHIPPPDTPCHTCQHPSENWLCLSCKEVLCGRFVNKHMLHHFHHTNHSLALSFSDLSFWCFSCDAYLDAQLIPQLRPIHQLAYVMKFGESPPLPLIQQHQPSSAR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02947 158 Pfam Zn-finger in ubiquitin-hydrolases and other protein 63 121 IPR001607 GO:0008270
Viun2g02947 158 MobiDBLite consensus disorder prediction 1 20 - -
Viun2g02947 158 SMART Zf_UBP_1 62 111 IPR001607 GO:0008270
Viun2g02947 158 SUPERFAMILY RING/U-box 41 130 - -
Viun2g02947 158 ProSiteProfiles Zinc finger UBP-type profile. 41 142 IPR001607 GO:0008270
Viun2g02947 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 144 IPR013083 -
Viun2g02947 158 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 4 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02947 - - aprc:113869857 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02947 2 33659583 33660481 Viun2g02947 2 33659583 33660481 ECH