Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02662 ATGGCGAAGGAAATCTTGACTCTTGATAATGCCACCACTTGCACATCTTGGAACATTTCCGGTACCAGACTCGCTTCTGCTTCCGCTGATGGCACTCTTTCAATCTTCGATTCCCGCGATCCATCTTCTTCCTCCCTCCGCTCTACTTTCAAATCTAGGGTTCTCGAAGGAAACATCGTGAAGATTGTTTGGGTTCCGCCAGAGTACGGTGATGCAGTCGCGTGTATTTCCGCCGATGGAATTGTGTCATTGTGGGAGGAGGTTGCAGAAGATTCGCAGTCTCTTCAGTGGAAGATGTGCAAAAGCTTTGGAAACAGTTCAGGCAAAGTCCTTGATGTTCAATTCGGGATCTCTTCGACTAGTTTGAAAATGGTTGCAGCATATTCAGATGGCAATGTAAGGGTTTTTGAGCTCTTGGACCCCTTAGAACTGAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGTTATTGAGTCGGTGTCTGCATTTGGAAAGGCTTCGTGCCTATCTGCATCCATATCTTGGAATGTACAAAAGGGTGGAAGCCAGGAATCAAGCTTCCTTATAGGTTTTAATTCAAATACATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAGGCGCATCAAAGATGGCTTCCGGTAGCAGAATTGGCACTGCCTGAAGACAGGGGTGATCAGGTTTATGCTGTTGCATGGGCACCAAATATTGGCAGACCGTATGAGATCATAGCGGTTGCAACTCACAAGGGACTTGCAATATGGCATCTTGGATTGAACCCTGACCATGATGGAAGACTCCCCGTAGAACGAGTTGCACTACTCTCAGGTCACCAGGGCATGGTGTGGCAAATGGAATGGGATATGAGTGGAATGACGTTGGCTACTACAGGGCAAGATGGAATGGTCCGATTATGGCAGTCAAATCTCAATGGCGTTTGGCATCAGCAAGCTGCATTTGAACCCACTTCGTAG 978 0.4663 MAKEILTLDNATTCTSWNISGTRLASASADGTLSIFDSRDPSSSSLRSTFKSRVLEGNIVKIVWVPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSGKVLDVQFGISSTSLKMVAAYSDGNVRVFELLDPLELRNWQLQAEFQNVIESVSAFGKASCLSASISWNVQKGGSQESSFLIGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEDRGDQVYAVAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHQGMVWQMEWDMSGMTLATTGQDGMVRLWQSNLNGVWHQQAAFEPTS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02662 325 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 308 IPR001680 GO:0005515
Viun2g02662 325 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 8 323 IPR037363 GO:0005198
Viun2g02662 325 FunFam Nucleoporin SEH1 9 323 - -
Viun2g02662 325 Gene3D - 9 322 IPR015943 GO:0005515
Viun2g02662 325 SMART WD40_4 96 137 IPR001680 GO:0005515
Viun2g02662 325 SMART WD40_4 43 86 IPR001680 GO:0005515
Viun2g02662 325 SMART WD40_4 269 308 IPR001680 GO:0005515
Viun2g02662 325 SMART WD40_4 1 37 IPR001680 GO:0005515
Viun2g02662 325 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 308 - -
Viun2g02662 325 SUPERFAMILY WD40 repeat-like 9 309 IPR036322 GO:0005515
Viun2g02662 325 Pfam WD domain, G-beta repeat 276 307 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02662 K14299 - gmx:100780788 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02662 2 32217747 32220692 Viun2g02662 2 32217747 32220692 ECH