Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02660 ATGATAGAAGCTTTTCGGGAGCGAAACCGTTCAACAAGAAAATTTTCTTACCGATTCTGTTATACCGTTTACATTCCTTTCTCTTCTCATTCTCTAAATCGATCTCTCACCAAAGCTATGACTTCCGAAGCAGAGCCTGCCGGTGAGGCTGCCAAACCTAGTACTCCCCGGCTTCTCAACATCTCGAAGTCTCTCATCGCCGGTGGAGTCGCCGGAGGAGTGTCACGAACTGCTGTAGCTCCTCTGGAGAGATTGAAAATTCTGCAGCAGGTTCAAAATCGTCAAAATATAAAATACAACGGAACAGTTCAGGGATTAAAATACATATGGAAAACTGAGGGTTTCAGAGGATTGTTTAAAGGAAACGGAACTAACTGTGCTCGTATTGTCCCAAATTCAGCAGTAAAGTTCTTTAGCTATGAGCAAGCTTCGACGGGTATTTTATGGCTCTATAAGCAGCAACCTGGAAATGAAGAAGCTCAGCTCACTCCCATTCTGCTGCGTCTTGGAGCTGGAGCTTGTGCGGGAATCATTGCCATGTCTGCCACTTATCCAATGGACATGGTGCGAGGAAGACTAACCGTCCAGACAGAAGCATCTCCACGTCAATACAGGGGAATTTACCATGCTCTTTCAACAGTCTTCAGGGAAGAAGGCCCTCGAGCTTTGTATAAAGGCTGGCTACCTTCAGTTATAGGAGTTGTACCATATGTGGGTCTTAATTTTTCTGTATACGAGTCTCTGAAAGACGGGTTGATCCGATCTAAACCATTTGGAATAGCTCAAGACTCTGAGTTAAGTGTGACAACAAGGCTTGCATGTGGGGCTGCTGCTGGAACGGTTGGCCAAACTGTGGCTTACCCCCTTGATGTCATTCGCCGAAGAATGCAAATGGTGGGATGGAAAGATGCTGCACCAGTAGTTGCTGGTGAGGGGAAGAACATAATGGAGTATACTGGCATGGTTGATGCATTCAGGAAAACGGTGCATCACGAAGGAGTTGGAGCATTATACAAGGGCTTAATTCCCAATTCAGTGAAGGTGGTTCCTTCCATAGCTATTGCTTTTGTGACATACGAGATGGTCAAGGACATTCTTGGAGTAGAAATGAGAATTTCTGACTGA 1125 0.4542 MIEAFRERNRSTRKFSYRFCYTVYIPFSSHSLNRSLTKAMTSEAEPAGEAAKPSTPRLLNISKSLIAGGVAGGVSRTAVAPLERLKILQQVQNRQNIKYNGTVQGLKYIWKTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASTGILWLYKQQPGNEEAQLTPILLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYRGIYHALSTVFREEGPRALYKGWLPSVIGVVPYVGLNFSVYESLKDGLIRSKPFGIAQDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAAPVVAGEGKNIMEYTGMVDAFRKTVHHEGVGALYKGLIPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02660 374 PRINTS Mitochondrial carrier protein signature 224 242 IPR002067 GO:0055085
Viun2g02660 374 PRINTS Mitochondrial carrier protein signature 121 141 IPR002067 GO:0055085
Viun2g02660 374 PRINTS Mitochondrial carrier protein signature 178 196 IPR002067 GO:0055085
Viun2g02660 374 PRINTS Mitochondrial carrier protein signature 64 77 IPR002067 GO:0055085
Viun2g02660 374 PRINTS Mitochondrial carrier protein signature 77 91 IPR002067 GO:0055085
Viun2g02660 374 PRINTS Mitochondrial carrier protein signature 275 297 IPR002067 GO:0055085
Viun2g02660 374 Pfam Mitochondrial carrier protein 60 145 IPR018108 -
Viun2g02660 374 Pfam Mitochondrial carrier protein 165 254 IPR018108 -
Viun2g02660 374 Pfam Mitochondrial carrier protein 265 366 IPR018108 -
Viun2g02660 374 SUPERFAMILY Mitochondrial carrier 58 361 IPR023395 -
Viun2g02660 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 59 146 IPR018108 -
Viun2g02660 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 365 IPR018108 -
Viun2g02660 374 Gene3D Mitochondrial carrier domain 57 368 IPR023395 -
Viun2g02660 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 163 251 IPR018108 -
Viun2g02660 374 FunFam Mitochondrial substrate carrier 57 368 - -
Viun2g02660 374 PANTHER SOLUTE CARRIER FAMILY 25 59 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02660 Viun-Chr2 32207200 32210411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02660 62 369 EF-hand Containing Proteins AT5G51050 38.835 8.06e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02660 K14684 - gmx:100784834 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02660 2 32207200 32210411 Viun2g02660 2 32207200 32210411 ECH