Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02626 ATGAGGGTGTTTCCTAGGTTCAGATCCCTGTCAAGAGCAGTTCATCAGGAACAGGAACAAGAACATGAAGAAGAGAAAAACAACGCAGAAAAGTTGAGCACGTCCCTGACAGTTTGGAGAAAATCCTTGGTGATGAGTTGCAAAGGATTCACTGTGATCGATTGTTATGGGAATTTGGTGTATCGGGTCGACAATTATATTGGTCGACCCAACGAAGTCACACTCATGGATGCCTCGGGAAGATCTATTCTCACCATGTTCCGCCGCAGGAGGCTTGGATTGTTGGATGAATGGTTTGTGTATGAAGGGGAAGTGGGGAACATTAGAAGAAGGAGAAGTAACTTGTCTAAGCCATCAAAGAGTCCAATTTGTTGTGTGAGGAAGAATGTTAATATTTTACATGGCAACTCCAATGTTCTGGCCTATGTGTTCAGTGGAGTTTCACATTCAGATAAACGGCATGTGGCGTTTACTGTAGAGGGTTCCTACGCACATCGTACGTGTAAGGTGTTGGATGAGTGCAGAAGGGTCGTGGCTGAAATTAAGAGGAAGGAAGCAAACACCAAAAACGTCTCTTTTGGGATAGAGATTTTTCAGTTGGTTGTCCATTCTGGCTTTGATCCTGCGTTTGCCATGGCACTCGTCTTACTCCTCGATCAAATGTTTTCGTGA 672 0.4435 MRVFPRFRSLSRAVHQEQEQEHEEEKNNAEKLSTSLTVWRKSLVMSCKGFTVIDCYGNLVYRVDNYIGRPNEVTLMDASGRSILTMFRRRRLGLLDEWFVYEGEVGNIRRRRSNLSKPSKSPICCVRKNVNILHGNSNVLAYVFSGVSHSDKRHVAFTVEGSYAHRTCKVLDECRRVVAEIKRKEANTKNVSFGIEIFQLVVHSGFDPAFAMALVLLLDQMFS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02626 223 SUPERFAMILY Tubby C-terminal domain-like 33 222 IPR025659 -
Viun2g02626 223 Coils Coil 12 35 - -
Viun2g02626 223 Gene3D - 29 223 IPR038595 -
Viun2g02626 223 PANTHER - 35 222 IPR007612 -
Viun2g02626 223 Pfam LURP-one-related 30 216 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02626 Viun-Chr2 32022551 32023836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02626 - - gmx:100804978 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02626 2 32022551 32023836 Viun2g02626 2 32022551 32023836 ECH
Viun2g02626 2 32022551 32023836 Viun3g00523 3 3116866 3118350 PCT