Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02621 ATGAACGGGGCGGCGGGGTTGCCATTGCCGGCAAATTCGTCGCCATCAGTGATCAACATGTACAGAATCAACAGAGTTACGGAGCGTTTGGCTTGGCTTGCTCAACCTGGCAACCGAGGCGATCCTAAAGAATTTTATAACCACTGCCTCTCCCTCTCTCGAGGCATTGATTATGCACTTGCCAATGGGGAAATTCCGGGCAATGCTCATGAGCTGCCTTTGCTGGTGAAGCAGATTTGTCAACTAAAGAATGATGAACTTTCGCAAGCTGCTATGATGGTGTTGATGATATCTGTAAAGGGTGCCTGCGAAATTGGATGGTTCCAAACGAAAGAATCACAAGAACTTCTTACTATTGTGGATGAGATCGGAAAAGTCTACAGCAGTATGGGGAGTATAAATGCTACACGTACACAATGCAATTCTGAAATATCAACTATTATGGAGAAGTTCTATCCTAATGTTAAACTGGGTTCAATACTTGCATCAATTGAGGCCCAGCCTGGATATGGAGCCTCTCTGGTTGATTTTCATATTACCAAGAGTGAATTTGTTAAAGACAAAATTTTTTTATTGGTGGCACAGTTAGATAACATTGAGATATCAGCATGCCTCATAAGTCCTCCGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTAGCCAATAGGACTTATGTTCAAATGGATCCTGGACCTCAAATGCCAACTGATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCGTTACATTGTACTCGTCGCCTATATGAGTTTTACACCCTTGCAAGAAGATCCGGTTCTTCAAGATTATCTCCAGCCTGTTGTTACCTCTATTGATTCTGATTCAGATATTATTGAGGGGGCTTCACAGATTTCGCTAAATTGTCCAATAAGCTTTACACGTATTAAGACTCCTGTCAAAGGGCGATCATGCAAACATTTTCAGTGTTTTGACTTTAACAACTTCATCAGTATCAATTCTAAAAGACCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTTTGTTATGGTGATATTCGACTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAGCATTACGGAAGTGATTGTCCTTGCTGATGGATCTTGGAAGGCAGTCTTGGAAAAGGATCATGATGTGGATAAGATGCAAAAGAAGGCCCCCAACCATGAAAAGGAACAAACTGAACCACAAGAATACACTTGCTCTCCTGCGACTGTTGACCTCACCGAAGATGATGATCATGTGGAGGCGATGGACTCTTCTGAAATTGTAGACAGAAAACCTCCCCAGGCATCTGTTCAAAGTCAGTTTGTCGCTCCAAATTCAACTTCCTTGGGTATGAACACTCCTGGTGTTAATCGAAATGTGGCTGCTCAATTAGATGACTTTTTGTCTGGGGTTTATATTGCCCGTAGTAGGTCTGATACCCCAATGGTTAATACTTTGGAGCTACCTGTTCTGCCTGATTCTATTTCTCCAGCATTTAATCAAGAATCTGCAGGTCGTGACAATAACCCTGCTGTTAACTCTGCCATGCGTAATCAAATTTCAGCACCAAACAATTTGCCGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGTAGGTCGTCCTCGGGGGCAAGACATATTAATAGAAGTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATTGGGACCACAGCAAAATCCACTAAATTTGAAGAATTCCCTGCTGTCTAGCAATTCCTCTTCTACTTCTCATATTTCTTTGCCCAGCTCTTCTACAGGAGATACTATGAAAGCCATACTTAGTGATACTGAAAGACAGCAACGTTTTTCTCGATCCCCAATGAATCTGCCTCAGGTCTCAGGTGTGAATTCACCTGCATTTCGGCATCACCCTGCAACACAGAATCGGGTACCATTACAGAGCCCGCCAACATCAACTCCATTGCAGAACACATCCAGACCTGGTTCATTATCTGATTTTAGAAATCAACACCTCCAGCATTCTCTGAATCGGCCACGACAGCATCCAACTTTCCGACCATCTACCACCCAATGGTCTCACATCCAGCAAGGTGTTCCACAATCTGGAAATTTACCGGCAGCAGGCCGGGCTGCTCCACCGCCTGCCAGACAAGGTATTTTCCATGCTAGGAATGTTCCGCCGGCTGCAACCACTGCTCATAGCCAACAATCTAGGGGTTTGGCTGCTAATCAGCCTCCTCCTAGACGGACAGCACCACTAGTTTCTCTCCAAAACCAAAGCGGTGTTGCAGGCACACCTTTTGCAACTGACAGTTTCCATGGAAGAGGAAACACAGCACAGTCAGTTTCTAGACCTGATGAATTATTCAGTACGCAAGCCGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCCTTTCGATGAGTCTATTGCACAGCGAATAATCACGCCAACACAAACTCAAAGTTCAAGGCCACCACCTCTCCGGCGAGCCACTGGGTCGACCCAACAGGATGTGCTTACGGCTAACAATAGAAATGCAAATGCTCACAATCGTCCTTCCACTTGA 2619 0.4467 MNGAAGLPLPANSSPSVINMYRINRVTERLAWLAQPGNRGDPKEFYNHCLSLSRGIDYALANGEIPGNAHELPLLVKQICQLKNDELSQAAMMVLMISVKGACEIGWFQTKESQELLTIVDEIGKVYSSMGSINATRTQCNSEISTIMEKFYPNVKLGSILASIEAQPGYGASLVDFHITKSEFVKDKIFLLVAQLDNIEISACLISPPQVNFLLNGKGVANRTYVQMDPGPQMPTDVTGMLKFGTNLLQAVGQFNGRYIVLVAYMSFTPLQEDPVLQDYLQPVVTSIDSDSDIIEGASQISLNCPISFTRIKTPVKGRSCKHFQCFDFNNFISINSKRPSWRCPHCNQYVCYGDIRLDRNMVEILKNVGESITEVIVLADGSWKAVLEKDHDVDKMQKKAPNHEKEQTEPQEYTCSPATVDLTEDDDHVEAMDSSEIVDRKPPQASVQSQFVAPNSTSLGMNTPGVNRNVAAQLDDFLSGVYIARSRSDTPMVNTLELPVLPDSISPAFNQESAGRDNNPAVNSAMRNQISAPNNLPMQMNHMNSVNEYGRSSSGARHINRSPVAVQALPVQSQALGPQQNPLNLKNSLLSSNSSSTSHISLPSSSTGDTMKAILSDTERQQRFSRSPMNLPQVSGVNSPAFRHHPATQNRVPLQSPPTSTPLQNTSRPGSLSDFRNQHLQHSLNRPRQHPTFRPSTTQWSHIQQGVPQSGNLPAAGRAAPPPARQGIFHARNVPPAATTAHSQQSRGLAANQPPPRRTAPLVSLQNQSGVAGTPFATDSFHGRGNTAQSVSRPDELFSTQAEQNWAPTGRMRGSLDLSQPFDESIAQRIITPTQTQSSRPPPLRRATGSTQQDVLTANNRNANAHNRPST 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02621 872 CDD SP-RING_PIAS-like 302 349 - -
Viun2g02621 872 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 46 684 - -
Viun2g02621 872 MobiDBLite consensus disorder prediction 760 798 - -
Viun2g02621 872 MobiDBLite consensus disorder prediction 831 872 - -
Viun2g02621 872 MobiDBLite consensus disorder prediction 533 557 - -
Viun2g02621 872 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 387 IPR013083 -
Viun2g02621 872 Pfam MIZ/SP-RING zinc finger 301 349 IPR004181 GO:0008270
Viun2g02621 872 ProSiteProfiles Zinc finger SP-RING-type profile. 290 371 IPR004181 GO:0008270
Viun2g02621 872 MobiDBLite consensus disorder prediction 578 712 - -
Viun2g02621 872 SUPERFAMILY RING/U-box 301 376 - -
Viun2g02621 872 MobiDBLite consensus disorder prediction 738 753 - -
Viun2g02621 872 MobiDBLite consensus disorder prediction 578 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02621 Viun-Chr2 32000291 32008186 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02621 K04706 - gmx:100780539 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02621 2 32000291 32008186 Viun2g02621 2 32000291 32008186 ECH