Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02506 ATGTCTTCTGATAGCGCAAAGGAAAATGTGTCGGTAGTTGATTCATCGGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGATATAGCGGAACACTCTTATAGTCTGATAGGGCATCCAACAGGCATTGGAGTGGAAAAGTGGAATGATATTAAGTATTTCATCATTAAGAGTTTGAACCGTCAAAATATTGATTTGTCTATAAAGAAAGGAATTTGGGCTACTCAAATTATGAATGAACGGATTCTAGAAGAAGCTTTTCATTATATGTTGCAGAACTCGGGCTGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGATACGCACAAATGATGTCCTCCATTGGAAAGGGTAGAGACAATGTTTGGAGTGAGGGAATTGGTAAAAGTAATCCTTGGGGCCGCAGTTTTAAGGTCCAGTGGCTGCGTTTCAATGATTTGCCTTTCCACAAAACTCTACATCTCAAGAATCCGTTGAATGACTATAAGCCTGTCAAAATTAGCAGAGACTGTCAGGAGTTATCTCCAGACGTTGGCCTAGCTCTTTGTGAACTTCTTGATGGTAAGAATGATACCAATGACCTACTGACCAGCTCATTAAGGGATGATTATTCATTTAAGGGCCGCTATGTCAGTACTCCAAGTTCAATGGGAAACGAAGACTATAAATTTAGTCCATTTCATATGTCATGGTCAATGCCCCTGCCTTATTCTTCCCCGTTTTACCAAAATCAACCTGTAGTAAATGAATCTCGTTCAACAAAGCAGAGAGTCAGTGGGACAATGCTTACTGAAACATTGCCTATCACTTCTTCTGTGTCGCCACAACTGTCAGGGATTAAACGTGCTCATTATAGTGGACATATTCCAGAGCTACCCACAAAGAATGACGTGTCTTCTCAATTAGATTTTTGGGGTGTGTCTCCAGGCTGCCCTTTAGCTGGCAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGAGGTCCATAGCAGAGGCAGGAAACAGTTACGCACCAGTGTCAGTATTTATATCAACATCATTTTGCTATTTTCTTGTGTATTTTTTTATCTAGACATGGTATCCATTAGTCACAGGAAACCATAA 1146 0.404 MSSDSAKENVSVVDSSVTEWRNDIGNSDDPDIAEHSYSLIGHPTGIGVEKWNDIKYFIIKSLNRQNIDLSIKKGIWATQIMNERILEEAFHYMLQNSGCVILIFSVNMSGSFQGYAQMMSSIGKGRDNVWSEGIGKSNPWGRSFKVQWLRFNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDVGLALCELLDGKNDTNDLLTSSLRDDYSFKGRYVSTPSSMGNEDYKFSPFHMSWSMPLPYSSPFYQNQPVVNESRSTKQRVSGTMLTETLPITSSVSPQLSGIKRAHYSGHIPELPTKNDVSSQLDFWGVSPGCPLAGSTLTEDDFLDMSYEEYLEEVHSRGRKQLRTSVSIYINIILLFSCVFFYLDMVSISHRKP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02506 381 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 50 210 IPR045168 -
Viun2g02506 381 Gene3D ph1033 like domains 47 211 - -
Viun2g02506 381 CDD YTH 55 193 IPR007275 GO:0003723
Viun2g02506 381 ProSiteProfiles YTH domain profile. 54 193 IPR007275 GO:0003723
Viun2g02506 381 Pfam YT521-B-like domain 55 193 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02506 Viun-Chr2 31418031 31422052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02506 K20100 - gmx:100784130 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02506 2 31418031 31422052 Viun2g02506 2 31418031 31422052 ECH