Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02490 ATGTCAGGAACAGGTAAAGTAGGAGACAACCTAAGCTTAAACGATGAAACCAACCAACCCTTGTCACCTCTTCCTCCTCCTCCACTACAAGCCCAAAACTATACAGCCAATTCAGTGAAGATGGTGATCTCAGAGCTAAGAGTTCAACGAGGAATAGCCCTTCCAATGATGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCTTTTTTAGGCCGTCTCGGGGAGCTGAGTTTAGCAGGTGGAGCTCTCGGCTTCACTTTCGCTAATGTCACTGGCTTCTCTGTTCTCAATGGTATATGCGGTGCCATGGAACCCATATGTGGCCAGGCTCATGGTGCCAAAAACTTCAGGCTTCTTCACAAGACCCTTCTCATGACAATCATACTGTTGTTATTGGTATCGCTTCCCATCACTTTCTTGTGGCTTAATGTTGACAAAATTTTCATTCATTTTGGCCAACAGCAAGACATCTCCATTGTTGCCGGGACCTATGCTTCCTTTCTCATACCCGACTTGTTTGTTGCCTCGCTCTTTTGTCCCTTGAAGGCCTATTTGAGCTCTCAGAGCATAACTCTTCCCACCATGTTTAGTTCGGCTGTGGCACTGGCTTTCCACATACCCGTTAACATAGTGCTCTCAAAGACCATGGGCCTCAGAGGAGTCGCCATGGCGGTATGGATTACTGATCTTATTGTCGTGGTTCTGCTTGCCATTTACGTTTTAATTATTGAGAACAAAAAGGGAAGCATGTGGAAGGAAGGAGGATGGTGGGATCAGAGCGTGGAGGATTGGATTCGGCTGGTGAAGCTTTGTGGATCATGCTGCCTCAACACGTGCCTTGAATGGTGGTGCTATGAGATTCTAGTTTTGCTTACTGGCCACCTCACGAATGCTAAGCAAGCCGTGGGAGTTTTGGCCATTGTGCTAAACTTCGACTATTTGCTTTTCTCAGTGATGCTGTCGCTGGCCACGTGTGTTTCCACCCGTGTCTCGAATGAGCTTGGCGCTAACCAAGCTGCTCTTGCTTACCGATCAGCGTATGTGTCTCTGACATTGGGTTTTATCTCTGGTTGCATAGGCAGTTTACTGATGGTGGCTGCCAGGGGAATTTGGGGGCCACTGTTTAGCCATGATAGGGGAATTATAAAGGGAGTGAGTAAGACAATGTTGCTGATGGCTGTGGTGGAAGTGTTTAATTTTCCGTTGGCAGTTTGTGGAGGCATAGTTCGAGGAACAGCACGACCTTGGTTGGGGGCGTATGCGAATCTAGGTGGATTTTATTTCCTGGCCTTGCCACTTGGTATTGTTTTTGCCTTCAAGCTCCGTCTTGGGCTTGTTGGACTCTTCATTGGGCTTCTTGTTGGTATAGTTACCTGTTTGACGTTGTTATTGGTATTCATTGCACGGTTAAACTGGGTGGAAGAAGCTGCCAAGGCACAAACACTGACAAGCAACGAGCAGGTTAAGGAACTTCCCAAATATGACGCAGAAAAACGAATAGACGCCCGTGAAAAAGTATAA 1533 0.471 MSGTGKVGDNLSLNDETNQPLSPLPPPPLQAQNYTANSVKMVISELRVQRGIALPMMAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGICGAMEPICGQAHGAKNFRLLHKTLLMTIILLLLVSLPITFLWLNVDKIFIHFGQQQDISIVAGTYASFLIPDLFVASLFCPLKAYLSSQSITLPTMFSSAVALAFHIPVNIVLSKTMGLRGVAMAVWITDLIVVVLLAIYVLIIENKKGSMWKEGGWWDQSVEDWIRLVKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAALAYRSAYVSLTLGFISGCIGSLLMVAARGIWGPLFSHDRGIIKGVSKTMLLMAVVEVFNFPLAVCGGIVRGTARPWLGAYANLGGFYFLALPLGIVFAFKLRLGLVGLFIGLLVGIVTCLTLLLVFIARLNWVEEAAKAQTLTSNEQVKELPKYDAEKRIDAREKV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02490 510 NCBIfam MATE family efflux transporter 55 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun2g02490 510 MobiDBLite consensus disorder prediction 1 28 - -
Viun2g02490 510 Pfam MatE 278 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun2g02490 510 Pfam MatE 55 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun2g02490 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 39 476 - -
Viun2g02490 510 MobiDBLite consensus disorder prediction 1 19 - -
Viun2g02490 510 CDD MATE_eukaryotic 45 482 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02490 Viun-Chr2 31327331 31329373 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02490 K03327 - gmx:100804083 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02490 2 31327331 31329373 Viun2g02490 2 31327331 31329373 ECH