Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02488 ATGGAGTGGCCTGCGTGCACGGACGAGTACGAAAAGCTTGTTATACGAATGAGCACTCCCAGGGTTGTTATTGACAATTCCGTGTTCTCTTCAGCTACTCTTGTCAAGGTTGACAGTGCTAGAAGGCATGGTATTTTATTGGATGCTGTACAAGTGCTCACTGACCTGGACCTTTCTATAAAGAAAGCCTATATTTCTGCTGATGGCAAATGGTGTATGGATGTTTTTCATGTCACCGACCAGAATGGAAACAAGATAACGGATGAAAACGTTTTAAAATATATTGAGCAGTCACTTGGGAGCATTCAGTGTGGGAGAACCACCAGCTCTAATGGTCTCACTGCGCTGGAATTGACAGGAACTGACCGAGTTGGTCTTTTATCGGAGGTGTTTGCCGTACTGGCTGATCTTCAATGTGATGTGGTTGAGGCGAAGGTTTGGACTCACAATGGACGTATTGCTTCCTTGATCTATGTAAAAGACTCTAGTTCTGGGTCTACTATTGAGGACTCTCAGAAAATTAATAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAAATTTCTGTTTCTATGGCTGCTATGCACACTGAAAGAAGGCTACACCAGATGATGTTTACAGACCGTGATTACGAAAGGACTCCCATTCTTGAGGTTACTTCTGATAAGCCAGTGGTGACAGTTCAGAATTGGGCAGGAAGGGGCTATTCAGTCGTGAATGTTCAGTGCAAAGATCGAACCAAGCTTTTATTCGATGTGGTATCCAATTTGACAGACATGGAATATGATGTTTTTCATGCAACTATTAACACAAATGATGACAGAGCATACTTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGCTCAGAACCAGAGCGACAACGTGTAATCCAATGCCTAAAAGCTGCTGTGGAGAGAAGGGCATCTGAGGGTGTTCGGCTAGAGTTATGTAAAGAAGACAGGCAGGGGCTTCTAGCAGAAGTAATGAGAACTTTCCGCGAGAATGGTCTCAATGTGACCAGGGCTGAGATATCCACAGTAGGGAATATGGCTACAAATGTATTCTATGTAACTGATGCCATTGGAAATCCAGCTGATGCAAAAATTATCGAATCCCTGAGGCAGAAAATTGGGTTAAGCTACTTAGAAGTGAAGGAATTGCCGTTGGTAAATCATCAGGGGATGCAGAGAGAGGATCAAGCAGTTGGAATTGGTGGGGCAGTGTTGTTTTCCATAGGGAGTCTGGTGAAAAGAAATCTGTATAGTTTGGGATTAATCAAATCCTGTTCCTGA 1326 0.4276 MEWPACTDEYEKLVIRMSTPRVVIDNSVFSSATLVKVDSARRHGILLDAVQVLTDLDLSIKKAYISADGKWCMDVFHVTDQNGNKITDENVLKYIEQSLGSIQCGRTTSSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDSSSGSTIEDSQKINKIELRLRNVLKGDNDIRSAKISVSMAAMHTERRLHQMMFTDRDYERTPILEVTSDKPVVTVQNWAGRGYSVVNVQCKDRTKLLFDVVSNLTDMEYDVFHATINTNDDRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCKEDRQGLLAEVMRTFRENGLNVTRAEISTVGNMATNVFYVTDAIGNPADAKIIESLRQKIGLSYLEVKELPLVNHQGMQREDQAVGIGGAVLFSIGSLVKRNLYSLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02488 441 SUPERFAMILY ACT-like 320 389 IPR045865 -
Viun2g02488 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Viun2g02488 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Viun2g02488 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
Viun2g02488 441 CDD ACT_ACR_4 322 393 - -
Viun2g02488 441 SUPERFAMILY ACT-like 110 172 IPR045865 -
Viun2g02488 441 Gene3D - 320 393 - -
Viun2g02488 441 Gene3D - 113 186 - -
Viun2g02488 441 CDD ACT_ACR_3 244 318 - -
Viun2g02488 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Viun2g02488 441 CDD ACT_ACR_1 32 101 - -
Viun2g02488 441 CDD ACT_ACR_2 114 187 - -
Viun2g02488 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Viun2g02488 441 SUPERFAMILY ACT-like 244 312 IPR045865 -
Viun2g02488 441 Pfam ACT domain 116 169 IPR002912 -
Viun2g02488 441 Pfam ACT domain 328 385 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02488 Viun-Chr2 31312500 31315637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02488 - - gmx:100780903 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02488 2 31312500 31315637 Viun2g02488 2 31312500 31315637 ECH