Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02482 ATGGCTTCCAAATTAGCGTCGCCGATGACGGTTCAGGCAGGTCGGATTCGGACCCTGAAAACCAGTTCGTCTGGAGAAGCGGGTTCGGGTCCCGTTGTGTACTGGATGTTCAGGGATCAACGGGTGAGAGACAACTGGGCTCTGATCCACGCCGTTGCTGAGGCCAACAAAGCCAACGTTCCCGTTGCCGTTGTTTTCAATTTATTCCACAGTTTTCTCGACGCCAAATCCCGTCATCTAGGGTTCATGCTCAGGGGCTTGCGCCAATTGGGCCACCGTATGCAGAATACTCTTCAAATTCCATTTTTCTTGTTCCAGGGAGAGGCGGAAGAGACCGTGCCAACGTTTCTTAGAGAATGTGGAGCTTCACTTTTGGTAACGGATTTCTCACCATTGCGGGAAATTCGAAGGTGTAAAGAAGAGATTTGCAAGAGGGTAAGCGATTCAGTTACGGTGCATGAAGTGGACGCTCACAACGTTGTGCCACTTTGGGTTGCCTCTGATAAATTGGAGTACAGTGCTAAGACAATCAGGACAAAGATAAACAAAAGGCTTTCTGAGTATCTCATCGATTTCCCTGAGATCGAAGATAATCTACCAACTAGGATGTGGGTCCTTCCCGAGAATCATTCCATTGATTGGGATGATCTCATTGCTGATGTGTTAAGGAGAGGAGCTGAGGTTCCTGAAGTTGATTGGTGTGAGCCGGGGGAAATTGCGGCAAGGGATGTGCTGATGGGAAGTGAAAATGGATTCTTGACTAAAAGGTTGAAAGGTTACTCTGTAGATCGCAACAACCCGTGCAACCCCAATGCACTTTCTGGTTTATCTCCCTATTTGCATTTTGGACAGATATCGGCTCAGCGATGTGCTTTTGAAGCACGTAAGCTGCGAAATTCACATCCTCAAGCCATTGATACTTTCTTGGAGGAGTTGATTGTGCGGAGGGAGCTTGCTGATAACTATTGCTTCTACGAGCCCCACTATGATTCAATAAAAGGAGCATGGGGTTGGGCTCGGAACACCTTAACCGAACATGCCACTGATAAGCGTGAACATGTTTACACGAGGGAACAATTGGAGAAGGCACAAACTGCTGATCCTCTCTGGAATGCTTCTCAGCTGGAGATGGTTCACAAGGGGAAAATGCACGGATTTATGCGAATGTATTGGGCAAAGAAGATACTTGAGTGGACACGAGGACCTGAAGAAGCCCTTGAGATATCTCTATATTTAAATGACAAGTATGAATTAGATGGGCGAGATCCAAATGGTTATGTTGGCTGTATGTGGTCAATATGCGGGGTTCATGATCAGGGGTGGAAGGAGCGGCCCATTTTTGGGAAAATTCGTTACATGAACTATGCAGGCTGCAAAAGAAAATTTGATGTCGATAAATACATTGCTTATGTCAATAAATTAGTTCGTGATCTTAAAAAGAGAAAGGCTGAAAACTTGCTGTCTCAGAGGGAAAAAGTTCTTCGCAGTTGTGTTCCAGAAGATTGA 1506 0.4595 MASKLASPMTVQAGRIRTLKTSSSGEAGSGPVVYWMFRDQRVRDNWALIHAVAEANKANVPVAVVFNLFHSFLDAKSRHLGFMLRGLRQLGHRMQNTLQIPFFLFQGEAEETVPTFLRECGASLLVTDFSPLREIRRCKEEICKRVSDSVTVHEVDAHNVVPLWVASDKLEYSAKTIRTKINKRLSEYLIDFPEIEDNLPTRMWVLPENHSIDWDDLIADVLRRGAEVPEVDWCEPGEIAARDVLMGSENGFLTKRLKGYSVDRNNPCNPNALSGLSPYLHFGQISAQRCAFEARKLRNSHPQAIDTFLEELIVRRELADNYCFYEPHYDSIKGAWGWARNTLTEHATDKREHVYTREQLEKAQTADPLWNASQLEMVHKGKMHGFMRMYWAKKILEWTRGPEEALEISLYLNDKYELDGRDPNGYVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVRDLKKRKAENLLSQREKVLRSCVPED 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02482 501 FunFam Deoxyribodipyrimidine photolyase 158 331 - -
Viun2g02482 501 Pfam DNA photolyase 32 194 IPR006050 -
Viun2g02482 501 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 31 213 IPR036155 -
Viun2g02482 501 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 5 492 - -
Viun2g02482 501 ProSitePatterns DNA photolyases class 2 signature 2. 435 454 IPR032673 -
Viun2g02482 501 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 30 163 IPR006050 -
Viun2g02482 501 Gene3D HUPs 9 157 IPR014729 -
Viun2g02482 501 NCBIfam deoxyribodipyrimidine photo-lyase 10 470 IPR008148 GO:0003904|GO:0006281
Viun2g02482 501 Gene3D - 158 331 - -
Viun2g02482 501 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 224 469 IPR036134 -
Viun2g02482 501 FunFam Deoxyribodipyrimidine photolyase 332 479 - -
Viun2g02482 501 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 332 482 - -
Viun2g02482 501 FunFam Deoxyribodipyrimidine photolyase 10 157 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02482 K01669 - gmx:100170749 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02482 2 31286630 31289969 Viun2g02482 2 31286630 31289969 ECH