Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02467 ATGAAAATTTCAGCTGCTGATATGAGAGAATCTGATTTTAGCGGTTCAACTTTCAATGGTGCATACCTTGAGAAAGCTGTTGCATACAAGGCAAATTTTTCAGGGGCCGATTTAAGTGATACATTGATGGATCGCATGGTTTTAAACGAAGCCAATCTCACTAATGCCATCCTCCTTAGAACAGTCCTCACACGGAGTGACCTTGGGGGTGCCATCATCGAAGGTGCTGACTTTAGTGATGCTGTGTTGGACCTTCCCCAAAAGCAGGCTTTATGCAAGTATGCCAGTGGCACAAATCCTGTTACAGGAGTGAGCACAAGAGTAAGCTTAGGTTGTGGAAACAAACGACGAAATGCTTATGGCTCCCCATCATCTCCCCTTTTAAGTGCTCCACCACAGAAACTGCTTGACCGAGATGGTTTCTGTGATGAAGCAACAGGACTTTGCGATGCAAAGTAG 459 0.451 MKISAADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLPQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCDEATGLCDAK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02467 152 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 3 151 - -
Viun2g02467 152 SUPERFAMILY Pentapeptide repeat-like 4 83 - -
Viun2g02467 152 Pfam Pentapeptide repeats (8 copies) 6 42 IPR001646 -
Viun2g02467 152 Pfam Pentapeptide repeats (8 copies) 48 82 IPR001646 -
Viun2g02467 152 Gene3D - 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02467 Viun-Chr2 31198740 31201644 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02467 - - gmx:100805220 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02467 2 31198740 31201644 Viun2g02467 2 31198740 31201644 ECH