Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02309 ATGATGTTTCTCTTTCAAGCAAAATGCATTAAACAAATGGAAGCTTTGACTCGAAGGTGTATATCTAGATGGTCTATTACACCTTATGCTCGTTACTCCGATACTTCTCAGAAGAAGTCTAAGCTTGCTCCTTTGCAGGAGAGACGAATGATAGACCAGTGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAGTGGTTGCTCCAGCTTGCGCAAGGGAAGACCCGATGGTGGCAATGGGGGGAGAGGCGGTGATGTGATTCTGGAATGCTCTCCCAGAGTTTGGGACTTCAGTGGTTTGCAGCGTCATCTGATAGCCGAGAAAGGAGGACCTGGGTCATCAAAAAAGTTGATAGGTAGCAGGGGTGCTGATAAGGTTGCCCGAGTACCCATTGGCACTGTACTTCATCTTGTCAATGGCGATATTCCGTCCGTTGTCAAAACTCAATCCTCGACTGATGTAGACCCTTGGGATATTCCTGGGGCACTTGTTGATGATTCTCCTGACACTGGCTATGGTTCTACCTCCAGTGATACACTAGGGGAAGTAAAAGCAACACATTCTATTGGCTGTTCCTCAACACAAGCTGAAGAAACAAATGCTAAGAAATGTGACAAATCAAGAGATGTTGCATCAACAGATGCATTCTCTCAACTCTCCACCTCTAATGGAGCTCCTGAATTTTGTACAGAGGATATTGAAGAGAACCAAGAGATAATATACAATGTTGCTGAGTTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGTGGAGAGGGCGGTCTGGGCAATGTGTCTAGTTCCAAAGATTCAAGGAAATCTATGGTTATGAAGGCAGAGGCTTGTCAACACATAGCTAATCTTCGGGATCCTAACAGTATCCACTCCTATCTGCTTGCAGGTTCACCTGGTGTTGAGACGGTTCTTATATTAGAACTGAAGAGTATTGCTCATGTAAGCTTTGTTGGAATGCCTAATGCTGGTAAAAGCACTTTACTCGGGGCAATATCAAGGGCTAAGCCTGCTGTTGGTGACTATGCGTTTACTACTCTTAGGCCAAATTTGGGGAATCTAAACTACGATGATCTCTCAATAACCGTGGCTGATATTCCCGGGCTTATAAAAGGTGCACACCAAAATCGTGGACTCGGGCATGCATTTCTGCGCCACATAGAGCGCACAAAGGTTCTTGCTTATGTGGTAGACTTGGCTGCTGCTTTAAATGGAAGGAAGGGAATTCCGCCATGGGAACAGCTCAGAGAGTTAATTCTAGAGCTAGAGTACCATCAGGACGGTTTGTCCAATCGGCCATCCTTGATTGTTGCAAATAAGATTGACGAGGAGGGTGCAGATGAAGTATACAACGAGTTAAAGAAAAGGGTACAGGGTGTTCCCATCTTTCCTGTATGTGCTGTTTTGGGGGATGGCATACCAGATCTTAAAGCTGGCCTTAAAATGCTTGTCAATGCTGAAACGTCATATAAACTCTGCCTAGATCAAATATTGGTTGCTTAG 1518 0.446 MMFLFQAKCIKQMEALTRRCISRWSITPYARYSDTSQKKSKLAPLQERRMIDQCKIFAKAGDGGSGCSSLRKGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGPGSSKKLIGSRGADKVARVPIGTVLHLVNGDIPSVVKTQSSTDVDPWDIPGALVDDSPDTGYGSTSSDTLGEVKATHSIGCSSTQAEETNAKKCDKSRDVASTDAFSQLSTSNGAPEFCTEDIEENQEIIYNVAELTEEGQQIVIARGGEGGLGNVSSSKDSRKSMVMKAEACQHIANLRDPNSIHSYLLAGSPGVETVLILELKSIAHVSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGNLNYDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRELILELEYHQDGLSNRPSLIVANKIDEEGADEVYNELKKRVQGVPIFPVCAVLGDGIPDLKAGLKMLVNAETSYKLCLDQILVA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02309 505 Pfam 50S ribosome-binding GTPase 320 445 IPR006073 GO:0005525
Viun2g02309 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 488 IPR027417 -
Viun2g02309 505 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 318 490 IPR031167 GO:0005525
Viun2g02309 505 ProSiteProfiles Obg domain profile. 48 317 IPR006169 -
Viun2g02309 505 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 36 486 IPR045086 GO:0003924|GO:0005525
Viun2g02309 505 Gene3D - 317 497 IPR027417 -
Viun2g02309 505 PIRSF GTP-binding_obg 47 500 IPR014100 GO:0000287|GO:0003924|GO:0005525
Viun2g02309 505 PRINTS GTP1/OBG GTP-binding protein family signature 341 359 IPR006073 GO:0005525
Viun2g02309 505 PRINTS GTP1/OBG GTP-binding protein family signature 368 383 IPR006073 GO:0005525
Viun2g02309 505 PRINTS GTP1/OBG GTP-binding protein family signature 320 340 IPR006073 GO:0005525
Viun2g02309 505 PRINTS GTP1/OBG GTP-binding protein family signature 385 403 IPR006073 GO:0005525
Viun2g02309 505 CDD Obg 318 489 IPR031167 GO:0005525
Viun2g02309 505 Gene3D GTP1/OBG domain 50 316 IPR036726 -
Viun2g02309 505 SUPERFAMILY Obg GTP-binding protein N-terminal domain 50 272 IPR036726 -
Viun2g02309 505 Pfam GTP1/OBG 51 136 IPR006169 -
Viun2g02309 505 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02309 Viun-Chr2 30412147 30414771 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02309 - - gmx:100808337 827.394