Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02307 ATGTCAAGAACAGTGGAACTAACAGTTTTATCCGCAGAGAATCTCCAAATGAATAAAAAACCCGTAAGAGGAAACACATTTGTGACGGTTCACTCCGACGCAAGCAGCGATGGAGGTGCCGTCACGAAAGTGGATTCCGAGGGTGGAAGCTACCCTTCGTGGAATGAGAAGGTTGTGGTGAACGTGCCGTTGCATGCAAGGTTCATAACCGTCGAGGTGAGGTCCAAAACGTCGTCGTCGTCGTCGTTGACGGGGTCTAACAGTGTTGGTGTTGCACGAATACCGGTTTCTGATTTCATCGGAGGGTATGTGCCAGAAAATCAGCTGCATTTCTTGAGCTATAGGTTGTGGGACGGTAACGTTAGGAGAAACGGGGTTATAAATATTTCGGTGAGGGTGAAAGTGCCGGAACGTTCTTCTTGTAGTTCCAATTCTATGCCGTTTGCGGCGGTGACTGGGGTGCCGGTGGCCGGTAATGGCTCCACCGGAGTTGTCACAGGGATTCCAGCTCTTTGGTTAAACTACCAAAGAAATGTCTGA 540 0.4944 MSRTVELTVLSAENLQMNKKPVRGNTFVTVHSDASSDGGAVTKVDSEGGSYPSWNEKVVVNVPLHARFITVEVRSKTSSSSSLTGSNSVGVARIPVSDFIGGYVPENQLHFLSYRLWDGNVRRNGVINISVRVKVPERSSCSSNSMPFAAVTGVPVAGNGSTGVVTGIPALWLNYQRNV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02307 179 PANTHER INGRESSION PROTEIN FIC1 2 145 - -
Viun2g02307 179 SMART C2_3c 4 108 IPR000008 -
Viun2g02307 179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 132 IPR035892 -
Viun2g02307 179 Pfam C2 domain 4 104 IPR000008 -
Viun2g02307 179 CDD C2_SRC2_like 4 129 IPR044750 GO:0006952
Viun2g02307 179 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Viun2g02307 179 Gene3D C2 domain 3 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02307 Viun-Chr2 30409060 30409892 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02307 - - gmx:100500298 286.96