Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02252 ATGGCGGAGAAGTTGTTAACAACATTAGGGGATCTGGAGAGGGACACGTTCGTGCCTCTTCTCTCCAAGCTGATTGGGGAATCAAAGCACGTGCAGAACAACCCGCCGGAGCTCGTTCCCGAAGAGGACAGAGTGGTGAAGCACGTGTTGGACGTTCTATTACCCTTCAGCACCACCACCGGAGGCGGTCCCTTGCTCCTCAACCACGTCACCTACACCCCCGGCCGGGGGAACCTCATCGTCGAGTACCCCGGCACCGTTCCCGGCAAAATCCTCTCCTTCGTTGGTTGCCACATGGACGTCGTCACCGCCAATCCCAACGATTGGGATTTTGATCCGTTTTCACTGAGCATTGATGGGGATAAGCTTCGGGGTCGTGGAACTACTGATTGCCTGGGCCACGTGGCACTTGTCGCGGAACTCATGAAAAAGCTCGGGCAAACCAAGCCGAATTTGAAATCAACCGTCGTTGCTGTTTTTATAGCCAATGAAGAAAATTCTTCAATTACTGGTATTGGTGTGGATGCGCTTGTCAAAGATGGCCTCCTCAATAAGCTGAAGAATGGCCCTCTGTACTGGATTGACACGGCAGATAAACAACCGTGCGTAGGAACTGGTGGTATGATACCTTGGAAACTTCAGTTCACGGGGAAGCTCTTTCACAGTGGATTAGCTCATAAAGCTATTAATGCAATGGAGCTAGGCATGGATGCTCTAAAGGAAATCCAGTCCCGATTTTACCGAGACTTCCCACCTCATCCTCAGGAACAGGTTTACGGGTTTGCAACTCCTTCAACCATGAAACCAACCCAATGGAGCTATCCAGGAGGTGGAATCAACCAAATTGCAGGGGAATGTACTATTTCAGGAGATGTCAGGTTGACTCCATTCTACAATGTAAAGGATGTAATGAAGAAGCTGCAAGAATACGTGGATGATATTAATAAGAATATTGAGAAGCTAGAAAGTAGAGGTCCAGTTTCAAAATATGTCCTACCCGATGAAAACTTAAGAGGAAGCATTACTTTAAGTTTTAACGAGGCACTGTCTGGAGTTGCTTGTGATCTTAATTCTAGAGGTTTCCATGTTTTATGCAAAGCAACTGAAGAAGTAGTTGGGCACGTAAAGCCTTACTCGATTACTGGGAGTTTGCCTCTCATTCGAGAACTACAGGAAGAAGGTTTTGATGTCCAAACATCTGGCTATGGTCTAATGGCTACTTACCATGCTGCGAACGAGTACTGCCTTTTCACGGATATGTCCCAAGGATATCGGGTCTTTGCGAGAATCATCTCTAAACTGGAAGATTGA 1311 0.4729 MAEKLLTTLGDLERDTFVPLLSKLIGESKHVQNNPPELVPEEDRVVKHVLDVLLPFSTTTGGGPLLLNHVTYTPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPNDWDFDPFSLSIDGDKLRGRGTTDCLGHVALVAELMKKLGQTKPNLKSTVVAVFIANEENSSITGIGVDALVKDGLLNKLKNGPLYWIDTADKQPCVGTGGMIPWKLQFTGKLFHSGLAHKAINAMELGMDALKEIQSRFYRDFPPHPQEQVYGFATPSTMKPTQWSYPGGGINQIAGECTISGDVRLTPFYNVKDVMKKLQEYVDDINKNIEKLESRGPVSKYVLPDENLRGSITLSFNEALSGVACDLNSRGFHVLCKATEEVVGHVKPYSITGSLPLIRELQEEGFDVQTSGYGLMATYHAANEYCLFTDMSQGYRVFARIISKLED 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02252 436 Pfam Peptidase dimerisation domain 204 317 IPR011650 -
Viun2g02252 436 FunFam Acetylornithine deacetylase, putative 11 202 - -
Viun2g02252 436 Coils Coil 304 324 - -
Viun2g02252 436 Gene3D - 207 323 - -
Viun2g02252 436 Gene3D Zn peptidases 9 192 - -
Viun2g02252 436 Pfam Peptidase family M20/M25/M40 95 432 IPR002933 GO:0016787
Viun2g02252 436 SUPERFAMILY Bacterial exopeptidase dimerisation domain 207 317 IPR036264 -
Viun2g02252 436 PANTHER ACETYLORNITHINE DEACETYLASE 6 435 - -
Viun2g02252 436 CDD M20_ArgE-related 12 434 - -
Viun2g02252 436 SUPERFAMILY Zn-dependent exopeptidases 11 434 - -
Viun2g02252 436 FunFam Peptidase M20/M25/M40 family protein 207 322 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02252 K01438 - gmx:100814676 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02252 2 30177962 30182206 Viun2g02252 2 30177962 30182206 ECH