Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01991 ATGTTAACAATGGAGCCTGAAAGAAAAGCTTGGATCTTGATCTTCTTCCTTACCATTTCCCTGTGTGGGGTGAAAGCATCAAGTGAAGGTCACCATGGCGAGCCTCAAGAGGGTCCTGTGGTGAAAAAGGATCAGAGAAGGACATTACTTGCCACTGAGTTCGGACAGATAACCGCCCTTGACATCAAGGAAGAACCAGACAAACTTCCCTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTTCCTGTGCTTCTACATGCAGATATGGTATTTTATGTTCATACAGGGAGTGGAAAGCTGACTTGGGCACATGATGATGATACTGGCACGATCCCTTTACGCGAAGGAGATCTCTGCAATCTCGTTGAAGGATCTGTTTTCTATATACAGAGCGACTTAGAGGCTGAGAGAAGGAAACTGAGGATCTATGCAATGTTAACCAATACAGAAGACAATACTTTTAATCCATCGATCGGTGCTTACTCAAGAATCGACCGACTGGTCAAGGGCTTTGATAAGAGAATCATGCAAGCAGCTTTGAAGGTACCAGATGATTTGATAGAAGAAATCGTCAACAAGAAAAATACCCCAGCTATAGTGCATGCGGATTCAAAGAAGACGAATATTGTCAAGACACTGGAGGCTTCGTTTCTTAAAAATTTTGTAGGTGTTGGGTCCAACTCCAACAAACTCGAAAAATACAACATCCTTAATCATGACCCTGACTTCAAAAATCGTTATGGTAGTAGCGTAGCAGTGTCCAAAAGGCAACTAAAGTCATTGAAGCGGACGAACATTGGATTTCTGATGGTGCATTTGAACGAGGGGTCAATATTGGGGCCTCATTGGAACCCGAAGGCAGCAGAGTTGGCAGTGGCAGTAGAAGGGAAAGGCATGGTCCGAGTGGTAAATGGAAGCAGCACTGAAGATGAGACAGAAAGCCAAAACATGAGGTTTAAGGTTAACGCGGGTGATGCTTTTGTGGTGCCTAGGTTTCATTCAATGGCTCAGATGGCATTCAACGATGAACCGTTTGTTTTTCTGGGCTTCAGCACTTCAGCAAAGGACAACCATCCTCAATTTTTGGCGGGAAAGGGATCTGTGCTTGACAATCTGGACAAGCATATACTGGCTACCTCTTTGGGTGTAAGTGACAGAACCGCTGAGGAACTTCAGCGTTCTCCAAGAGATGCCATCATTTTCGGGTGCAGCTCCTGCGCAGAGGAAGAGGAGAATACAATGGAGGAGGAAGAAAGGGAGAGGAAGAGAGAGGAGGAGGAGAGAAAGAGAGAAGAAGAGGAAGAAGACAGGAAGCAAGAGAGAGAGAGGGAGAGAGAGGAAGAGGAAGCCAAAAGACAGCAAGAAGAGAGGGAAAAGAAGCGTGAGGAGGAGGAAGAGAGAGAGCATGAAGAAGGTGGTGGGAGAGGGAAAGAAAGGGAAAGGAAAGAAGAGAGGGAGAGGGAGGAAGAAGAAGCTAGAAGGCAACAGGAGAAGAGGGAAAAGAAAAGAGAGAAAGAAAAAGGAGAAGAAACAGAAGACAAAAGAGAGCAAGAAAAGGAGCAAGATCAAGATAAAAGGGAAGGGGAAAGGGAAGCGGAAGCAGCAGCACAGAAGGAGCAAGAACAAGCTAGAAGAGAGCAAGAAAAGAGAGAGAAGAAGCGACAGGAGGAAGGACAAAGGGAAGGAAAAGAAGAAGAAGATCCGACATGGTGGGAGAGACCGAGGAGAGAGAAGGGGAAGAGATCATCATCAGAAGAAGAAGTAGCAGAAGAGGAGCAAGAACAAGCCAAGAGACAACAAGAAGAGAGGGAGAAAAGAAGAGAGCAAGAGGGTGATGCTGATCCCTTTGAAGGAAGGAGAGCTTTGAAAGTCAGGAACGTTTGA 1896 0.4568 MLTMEPERKAWILIFFLTISLCGVKASSEGHHGEPQEGPVVKKDQRRTLLATEFGQITALDIKEEPDKLPYHLQFITLEPNSLFLPVLLHADMVFYVHTGSGKLTWAHDDDTGTIPLREGDLCNLVEGSVFYIQSDLEAERRKLRIYAMLTNTEDNTFNPSIGAYSRIDRLVKGFDKRIMQAALKVPDDLIEEIVNKKNTPAIVHADSKKTNIVKTLEASFLKNFVGVGSNSNKLEKYNILNHDPDFKNRYGSSVAVSKRQLKSLKRTNIGFLMVHLNEGSILGPHWNPKAAELAVAVEGKGMVRVVNGSSTEDETESQNMRFKVNAGDAFVVPRFHSMAQMAFNDEPFVFLGFSTSAKDNHPQFLAGKGSVLDNLDKHILATSLGVSDRTAEELQRSPRDAIIFGCSSCAEEEENTMEEEERERKREEEERKREEEEEDRKQEREREREEEEAKRQQEEREKKREEEEEREHEEGGGRGKERERKEEREREEEEARRQQEKREKKREKEKGEETEDKREQEKEQDQDKREGEREAEAAAQKEQEQARREQEKREKKRQEEGQREGKEEEDPTWWERPRREKGKRSSSEEEVAEEEQEQAKRQQEEREKRREQEGDADPFEGRRALKVRNV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01991 631 Pfam Cupin 238 391 IPR006045 -
Viun2g01991 631 MobiDBLite consensus disorder prediction 409 631 - -
Viun2g01991 631 SUPERFAMILY RmlC-like cupins 48 398 IPR011051 -
Viun2g01991 631 Coils Coil 585 615 - -
Viun2g01991 631 Coils Coil 411 476 - -
Viun2g01991 631 PANTHER OS03G0336100 PROTEIN-RELATED 9 410 - -
Viun2g01991 631 CDD cupin_7S_vicilin-like_C 245 402 - -
Viun2g01991 631 MobiDBLite consensus disorder prediction 420 631 - -
Viun2g01991 631 Gene3D Jelly Rolls 230 407 IPR014710 -
Viun2g01991 631 Coils Coil 530 570 - -
Viun2g01991 631 Coils Coil 479 525 - -
Viun2g01991 631 CDD cupin_7S_vicilin-like_N 49 210 - -
Viun2g01991 631 Gene3D Jelly Rolls 32 217 IPR014710 -
Viun2g01991 631 SMART Cupin_1_3 238 393 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01991 Viun-Chr2 28430747 28433589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01991 40 455 Miscellaneous Gene Families AT4G36700 40.868 6.22e-99 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01991 - - vum:124824391 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01991 2 28430747 28433589 Viun2g01991 2 28430747 28433589 ECH