Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01969 ATGGTGCACAGCGCGTACGATTGCGTGGAGCTGGTGCGTGAGTGCCCCGCCAAGATCGAATCCGTCGAAGCCTACGGTTCCAAGCTCCTACTGGGTTGTTCCGATGGATCGCTCCGAATATTCGCGCCGGAAACGGAATCCTCCTCCGATGGCTCCAAGTCCTACGCGTTGGAGAGGAACCTTGTCGGGTTCGCGAAGAAGCCCGTGCTATCAATGGCGGTGGTGGAGTCGCGAGAGTTCCTCATATCGCTCTCCGAATCTATCGCTTTCCACAAACTACCTTCCTTCGAGACTATCGCGGTGATCACCAAGGCCAAGGGCGCCAACATCTTCTGCTGGGACCACCGCCGAGGCTTCCTCTGCTTCGCCAGGCAGAAGCGCGTTTGCATCTTCAGACACGACGGTGGCAGGGGATTTGTGGAAGTGAAAGAGTATGTCGTGGGGGATGCGGTGAAATCCATGTGTTGGTGCGGCGAGAATATATGTTTGGGGATTAGAAGAGAGTACGTGATTCTGAATGCTTCGAATGGAACTCTGTCTGAGGTTTTCACTTCGGGGAGACTAGCGCCTCCTCTGGTCGTTTCTCTTCCCACTGGAGAACTCCTTCTTGGAAAGGAGAATATTGGGGTTTTTGTGGACCAAAATGGGAAGCTTCTTCCCGAAGGTAGGATTTGCTGGTCTGAGGCTCCTTTGGAAGTTGTGATTCAGAAGCCATACGCTATAGCTTTGCTGCCCAGATTTGTGGAGATTCGATCTCTCCGAGCTCCTTATTCGTTGATACAGACAGTTGTTCTTCGAAATGTTCGCCACCTTTGCCAGAGCAATGATTCCATGATACTTGCTTTGGATAATTCAGTTCATGGCCTCTTCCCTGTTCCCCTAGGAGCCCAGATAGTCCAATTAACAGCTTCTGGCAACTTTGAGGAGGCCTTGTCACTGTGCAAACTTCTTCCACCTGAAGATTCAAGTCTCCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATACGCTCACTATCTTTTTGAGAATGGGAGCTATGAAGAGGCTGTGGAACATTTTCTGGCATCTCAAGTAGATATAACCCATGTGCTTTCACTGTATCCATCAATTATTCTTCCAACCACAACTATTGTTCACGACCTAGAAAAGTTGGACATTTATGGGGATGCTTCATATCTCTCAAGAGCTTCTTCAGGTGTGTCAGATGATATGGAACCCTCATCAACATCTCATATGTCAGAATATGATGAGAATGCAGCACTTGAATCAAAAAAAATGAACCATAATATGCTTATGGCTCTCATAAAATACTTACAGAAGAAGAGATATAGTTTTATTGAGAAGGCCACTGCTGAAGGAACTGAAGAAGTCGTTTTAGATGCTGTTGGGGATAACTTTGCATCTTACAACAGGCTTAAGAAATCAAACAAGGGGCGTGGTAGTATGCCTGTTAGTTCTGGAGCTCGGGAGATGGCTTCAATATTGGATACTGCTTTACTCCAAGCTTTGCTTCTTACTGGACAACCTTCAGCGGCTTTAGAGTTACTGAGAGGTGTTAACTACTGTGATTTGAAAATATGTGAAGAAATACTTCGAAAAGACAACCACAATGTTGCTTTATTAGAACTTTACAAGCACAACTCATTGCACCGGGAGGCTCTTGAACTTCTTCACAAATTGTTGGATGAGTCAAAATCTGGCCAGTCTAAAATTACACAAAGTTTCAAGCCTGAGGATATTGTGGAGTATCTCAAGCCGCTCTGTGGGACAGACCCCATACTTGTACTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGCCCATCTCAAACTATTGAGCTCTTTCTGTCTGGAAACATTCCAGCTGATATGGTGAGCTCATATTTGAAGAAGCATTCTCCAACCATGCAAGCTAGGTACTTGGAGCTCATGCTTGCAATGAATGAGAATGCGGTATCTGGCAATTTGCAGAATGAAATGGTACACATATATCTTTCTGAAGTACTCGATTGGCATGCTGGTTTATGTGCTCAACAAAAATGGGATGAGAAAGATTATTCCCCAACAAGAAAAAAATTATTGTCTGCCTTGGAGACCATTGCAGGATACAATCCAGAGGCTTTGCTAAAACGTCTTCCACAGGATGCTTTATATGAAGAGCGTGCGATATTGTTGGGAAAAATGAACCAACATGAACTGGCATTATCTTTGTATGTTCACAAGCTCAATGCTCCAGAACTGGCATTGTCATATTGTGATCGGGTCTATGAGTCTATGCGCCAGCCATCTGCAAAATATTCCAGTAACATATACCTTGTTCTTTTGCAAATTTATTTGAATCCTCGAAGGACCACAGCAGGTTTTGAAAAGAGAATTACAAATCTATTATCCCCACAGAATAAAACCATTCCAAAGCTTACTTCTACGCCATCCATGAGAAGTAGAGCTCGAGGGTCTAAGAAAATTGCTGCAATAGAGGGTGCAGAGGACACAAAAGTTAGTTTAAGTAGCACTGACAGTGGCAGGAGTGATGGTGATGCAGATGAATATAGTGAGGGTGGTTCTACTACTATCATGCTTGATGAGGTCCTTGATTTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCCCTTAAACTTCTACCGAAAGAGACAAAATTACAGGACCTGCTCTCATTTCTTGGACCCCTTTTGAAAAAATCAAGTGAAATGTACCGAAACTGTTCGGTGATCAAGAGCTTGAGACAAAGTGAGAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAAACAGTAGTGAAGATAACCGGAGATAGCATGTGCTCTCTGTGCCATAAGAAAATAGGGACTAGTGTTTTTGCTGTCTACCCAAATGGTAGCACTCTCGTGCACTTTGTCTGTTTCAGAGATTCTCAAAATATGAAAGTGGGTGGCAAAGGGTCTCAATTGAAGAAGCGATTAGAAACTGCTGGCTATACCAATTAG 2991 0.4433 MVHSAYDCVELVRECPAKIESVEAYGSKLLLGCSDGSLRIFAPETESSSDGSKSYALERNLVGFAKKPVLSMAVVESREFLISLSESIAFHKLPSFETIAVITKAKGANIFCWDHRRGFLCFARQKRVCIFRHDGGRGFVEVKEYVVGDAVKSMCWCGENICLGIRREYVILNASNGTLSEVFTSGRLAPPLVVSLPTGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRAPYSLIQTVVLRNVRHLCQSNDSMILALDNSVHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSYEEAVEHFLASQVDITHVLSLYPSIILPTTTIVHDLEKLDIYGDASYLSRASSGVSDDMEPSSTSHMSEYDENAALESKKMNHNMLMALIKYLQKKRYSFIEKATAEGTEEVVLDAVGDNFASYNRLKKSNKGRGSMPVSSGAREMASILDTALLQALLLTGQPSAALELLRGVNYCDLKICEEILRKDNHNVALLELYKHNSLHREALELLHKLLDESKSGQSKITQSFKPEDIVEYLKPLCGTDPILVLEFSMLVLESCPSQTIELFLSGNIPADMVSSYLKKHSPTMQARYLELMLAMNENAVSGNLQNEMVHIYLSEVLDWHAGLCAQQKWDEKDYSPTRKKLLSALETIAGYNPEALLKRLPQDALYEERAILLGKMNQHELALSLYVHKLNAPELALSYCDRVYESMRQPSAKYSSNIYLVLLQIYLNPRRTTAGFEKRITNLLSPQNKTIPKLTSTPSMRSRARGSKKIAAIEGAEDTKVSLSSTDSGRSDGDADEYSEGGSTTIMLDEVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLKKSSEMYRNCSVIKSLRQSENLQVKDELYSQRKTVVKITGDSMCSLCHKKIGTSVFAVYPNGSTLVHFVCFRDSQNMKVGGKGSQLKKRLETAGYTN 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01969 996 Pfam CNH domain 26 273 IPR001180 -
Viun2g01969 996 SUPERFAMILY WD40 repeat-like 26 184 IPR036322 GO:0005515
Viun2g01969 996 Pfam Vacuolar sorting protein 39 domain 2 863 971 IPR019453 -
Viun2g01969 996 ProSiteProfiles Citron homology (CNH) domain profile. 16 278 IPR001180 -
Viun2g01969 996 MobiDBLite consensus disorder prediction 827 852 - -
Viun2g01969 996 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 598 785 IPR000547 GO:0006886|GO:0016192
Viun2g01969 996 Pfam Vacuolar sorting protein 39 domain 1 495 603 IPR019452 -
Viun2g01969 996 Pfam Region in Clathrin and VPS 624 753 IPR000547 GO:0006886|GO:0016192
Viun2g01969 996 PANTHER CNH DOMAIN CONTAINING 1 977 IPR032914 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01969 Viun-Chr2 28245253 28252323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01969 K20183 - gmx:100805342 1808.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01969 2 28245253 28252323 Viun2g01969 2 28245253 28252323 ECH