Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01966 ATGGAGGCCGAAGCTATGGCCATGGAATCAACGGAGTTAAAGGTGTCGGAGCTATTGAAAGAGGTCAACGTAGATTACTCTCCTCAGTTCACTAAGCTCGTTGACGACACCGTTTCCGCCATCAAAGCCTCCATAGACAAAATCCCCAACGATTTCAAGGTAACTGCAGATTTAGCATCGCGGTTTGTTTCGGACATTGGCGCCGATAAGGTCGAGTTTAAGTTTAAGAAGCCAGAGTTTATTAAGACTGGTGGAAGTTACTCCATACAGAGTATTGCGAGGCCTGAAGTTAATGCTGATCTTATTATCAGGTTACCAAAGGAATGCTTTCATGAGAAGGATTATTTAAATTACAGATACTACGCCAAGAGGTGTTTGTATTTATGTTTGATAAAGAAGTATTTGGAGAGGTCTTCATCTATTGATAGGGTTGAATGGTCCACTATGCAGAATGAAGCCAGAAAACCCTTGCTCATTGTGTATCCAGCTGCGAAGCTTGTTGAAGTGCCTGGTTTTTTTGTAAGAATTATTCCGTCCGCCAAGGCTGTATTTAGCATAGCAAAGTTGAACCTGAAGCGCAACAACATTCATAACCTGAGTAATGGGATTGATCTTCAGGCTACACCGAAGTACAATTCTAGTATTCTGGAAGACATGTTTATAGAGGATGCTGAATTCGTTGACAAGTATTTTGTTGGATGGAAGGAACTAAGGGAGGCTTTAATACTGCTTAAGGTTTGGGCCCGGCAAAGAAGTTCAATATATGTTCATGATTGCCTGAGTGGGTTTTTGATTTCTGTCATACTGGCATACCTTGCTTCTAAGCAACATATTAGCAATTCAATGAAGGCAACTGAAATATTCCGCGTCACCTTGAATTTCATTGCAACATCAGAGTCGTGGAACCGAGGGTTATACTTTCCAAAGGAAGGCGAGATCCATATTACGAAGGAGCAAAAGGTTCAACTTAAGGAGTCATTTCCAATTCTCATATGTCATCCATCTGGAGGATTCAATCTAGCTTTCCGAATGTCCAGGATTGGTTTTACTCGGCTTCAAGATGAGGCTGCTATGACACTTAGGTGCTTACAAAAGTGTAATGATGGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAGTATGACTATTGCATGAGAATAAATTTGAAGGGAAAGAATGAGGTATTTGCATTTGGATTTTGTTTGGACGATGAGTGCTGGAGATCATACGAGGATAAAATACATGGTATTTTATCTAAAGGGTTAAACGATAGAGCAAGAGCCATTCAAGTTACATGGAGAAATACACAATGCAAGTGGAGTGTGGACGATGGCTTGTCGGTATTTGATAAAGTACCGTTGTTCATAGGAATTTCAGTGAGTACTTTGGAGAAAGCATATAGGATGGTTGATATTGGCCCAAATTCCGAAAGTAAAGAGGAGGCTCTTGAATTTCAAAAGTTTTGGGGAGAGAAAGCTGAGCTTCGAAGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTATGGGAAAGTGAGCAATGGGCTAGACATCTTGTTTTGAAAAGAATATCTGAGCATGTACTTAGTCGACATCTTTCTCTATCCTCGGAAGATATTGTAGTTGTTGTGGATCAACTAGATTTCTCTTTGATTCACGGTGGTGGAGATCCTATATCATACGCTGGTAGTTTGCTTGGGGCATTTGATGTTTTATCAAAGCGCTTGCGTCTTATTGAAGACCTTCCATTGAAGGTGTCCAGTGTACTGCCTTTAGACTCTGCTTTCAGGTTTTCATCAGTGTTCCCTCCGGAACCTCATCTTCTAGCTAATGAAAAAATTGAATCACTCAGATTGAGCAAGTTTGTTCCATCATGCATTCAAGCACTGGAAGTTATGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAGACAAAATCTAGCTTCCTTTTTCAAATTGGATTGAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCCACTGAGGATAATGTGGACGTGCTAATGTCAGGATATGCTTTTCGTCTAAAAATTTTGCATGAAAGAGGCCTTAGCTTGCTGAAAAAGGAAGTTGGGGATGTTCAGGCTAAGCAAGTTTCTTCCGTTGACAAGAAACTTTTTATCCATAGTCAACATGCTAATATGATCAATGGATTACAAAGTCGTTATCCAATATTTGGACCAGTAGCTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCTTAGTAGAAGAGGCTGTCGAGCTATTGGTTGCATATCTTTTTCTTAATCCTTTGCCATTTGATGTTCCCTGTTCACGGATCACTGGGTTTTTGAGGTTCCTGCGGTTACTCTCAAACTATGATTGGACTTTCTCTCCATTGGTTGTCGACATAAATAATGACTTGAGCCAAAGTGATGAGAAAGAAATAAAGGACAACTTTTCGCTAAGAAGAAAAGGTCAGGGTGAGAGTGGACAAAGTGTAGGACCAGCAATGTTCTTAGCTACAGTTTATGATAAAGAATCTGAGGCTTGGACTAGATTATCACCTAGTGGAATGGAACTAAAAAGGTTAGTTGCATATGCCCGAAGCAGTGCCAATTTGCTGACAAAACTTACATTTCAAGAAGAGATCGGTCCATACAGATGGGAGTGCCTTTTCAGGACTCCTTTAAACAATTATGATGCAGTAATTCTTCTCCACAAGGACAATCTCCCGTATCCCCAAAGGCTTCTCTTCCCTTCAGAAGTTAATCATGGAATACATGTTGCAGAAGGACAAGCCAGCAAGTGTTTTCAACCCTTTTTTTTGCCTAAAGATTTGAAGGGCAGGGCAGAGGAACTTAAAAATAAGTTGCTGGTGGATTTTGATCCATCAAAGTGCTTTATCAGAGACTTAAAGCATGAGTTCTCAGCCTCATTCCAAATATGGCATGATTATCTGGGAGGCGATATTATTGGTCTAACATGGGGGGAATCATATTCTTCCAAGAAGCGGAAGCACGAGGAAGTGGTTGATGAAGAATATAATCCTTTGAAGGTATTAAAAACAGTGGGGGAGATTGGGAAAGGATTTGTGAGGAGTGTATACTTTCTCAAGCCCCCAAAGCTCAGGAATTAG 3165 0.4054 MEAEAMAMESTELKVSELLKEVNVDYSPQFTKLVDDTVSAIKASIDKIPNDFKVTADLASRFVSDIGADKVEFKFKKPEFIKTGGSYSIQSIARPEVNADLIIRLPKECFHEKDYLNYRYYAKRCLYLCLIKKYLERSSSIDRVEWSTMQNEARKPLLIVYPAAKLVEVPGFFVRIIPSAKAVFSIAKLNLKRNNIHNLSNGIDLQATPKYNSSILEDMFIEDAEFVDKYFVGWKELREALILLKVWARQRSSIYVHDCLSGFLISVILAYLASKQHISNSMKATEIFRVTLNFIATSESWNRGLYFPKEGEIHITKEQKVQLKESFPILICHPSGGFNLAFRMSRIGFTRLQDEAAMTLRCLQKCNDGGFEEVFMTKIDYAVKYDYCMRINLKGKNEVFAFGFCLDDECWRSYEDKIHGILSKGLNDRARAIQVTWRNTQCKWSVDDGLSVFDKVPLFIGISVSTLEKAYRMVDIGPNSESKEEALEFQKFWGEKAELRRFKDGRIAESTVWESEQWARHLVLKRISEHVLSRHLSLSSEDIVVVVDQLDFSLIHGGGDPISYAGSLLGAFDVLSKRLRLIEDLPLKVSSVLPLDSAFRFSSVFPPEPHLLANEKIESLRLSKFVPSCIQALEVMIQLEGSGNWPMDEIAIEKTKSSFLFQIGLSLQKKWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEVGDVQAKQVSSVDKKLFIHSQHANMINGLQSRYPIFGPVARLAKRWAASHLFSACLVEEAVELLVAYLFLNPLPFDVPCSRITGFLRFLRLLSNYDWTFSPLVVDINNDLSQSDEKEIKDNFSLRRKGQGESGQSVGPAMFLATVYDKESEAWTRLSPSGMELKRLVAYARSSANLLTKLTFQEEIGPYRWECLFRTPLNNYDAVILLHKDNLPYPQRLLFPSEVNHGIHVAEGQASKCFQPFFLPKDLKGRAEELKNKLLVDFDPSKCFIRDLKHEFSASFQIWHDYLGGDIIGLTWGESYSSKKRKHEEVVDEEYNPLKVLKTVGEIGKGFVRSVYFLKPPKLRN 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01966 1054 Pfam Nrap protein PAP/OAS-like domain 237 378 IPR035367 -
Viun2g01966 1054 Pfam Nrap protein domain 6 906 1044 IPR035371 -
Viun2g01966 1054 Pfam Nrap protein domain 3 382 537 IPR035368 -
Viun2g01966 1054 Gene3D - 208 381 - -
Viun2g01966 1054 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 2 1045 IPR005554 -
Viun2g01966 1054 Pfam Nrap protein domain 1 100 223 IPR035082 -
Viun2g01966 1054 Pfam Nrap protein PAP/OAS1-like domain 5 740 892 IPR035370 -
Viun2g01966 1054 FunFam Nucleolar protein 6 211 381 - -
Viun2g01966 1054 Pfam Nrap protein nucleotidyltransferase domain 4 566 737 IPR035369 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01966 K14544 - gmx:100776157 1885.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01966 2 28222497 28232398 Viun2g01966 2 28222497 28232398 ECH