Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01959 ATGGCCGCTGCAAGGTTAACCTCATACGTGGCGGTAACATCCGCTGCGGTGGTTTCCATGTCCACGTTCTCCGATCGTGCCTACGCCGACTCTTCCTTCCGATTCCCTTTCTTCTCTTCTTCACCTTCCAATGCGCCGTCGCCGCCGAACCAGTCTTCCGACAACAATTCAGAGCCTCCGGCGCCTGAGGAACCTAACAAGTCGGGTTTCGACCCGGAATCGTTAGAAAGAGGAGCCAAAGCTCTCCGTGAAATCAACAGTTCTTCCTACTCAAAGCAGGTGTTTGATTTAATGCGAAAGCAGGAGCAAACTCGCCTCGCTGAATTAGACGCTGAGAGAGTTCACTACGAACTTATTCAGTCTCAAGGAGATATTGAAAGACAGCGGAAAATGGCTGAAGAACAACGTAATTTAATACAAGAGCAAGCCCAGAGACAGGCCCAGGTGCTGCGATTCGAGGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCCCAGAGGCTACGTAATGTTGAATTGGTCAAGATGCAAGAGGAGTCTTCTGTAAGAAAGGAGCGGGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGAGAGAGAGCTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCTGAGGCTGAAGGCCGAGCTCATGAAGCTAAGTTGACCGAGGAGCATAATAGGAGAATGCTTATAGAACGACTGCAAGGTGAAAGGGATAAATGGCTTGCTGCAATTAACACAACTTTCAGTCACATTGAAGGTGGTCTAAGGGCCTTGTTGACTGATAGGGACAAATTGATTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTCACCTGGGGCTATATTAATCGAATTTTAGGGCAGCCATCATTGATCCGGGAATCATCAATGGCAAAATTCCCTGGATCAAAGATAATTTCTCAAGCTAAAAATAAACTTCTACATAGTAGTACTTTGGCTGGGGCAGAAAAACCTATTGGGAGTAAAAATGGTCTTGGAAATGTAATCCTCCATCCATCGTTGCAGAGAAGAATAGAGCATCTTGCACGTGCAACATCAAATACCAAAGCCCATCAGGCACCATTTCGTAATATGCTTTTTTATGGGCCCCCAGGCACTGGTAAAACGATGGTTGCAAGGGAAATAGCGAGGAGATCGGGTTTGGACTATGCCATGATGACCGGAGGAGATGTTGCACCTCTTGGTGCCCAGGCTGTTACCAAAATTCATGATATATTTGATTGGGCCAAGAAATCTAGGAAAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAATAGCTCACTCATGAGTGAAGCTCAGCGAAGTGCTTTAAACGCATTGCTCTTCAGAACTGGTGATCAGTCTCGAGACATAGTACTTGTTCTTGCGACAAACAGACCGGGTGATCTTGACAGTGCAGTTACTGATCGCATTGATGAAGTGATTGAATTTCCGCTTCCAGGAGAGGAGGAGCGTCTGAAGTTATTGAAGCTGTATTTAGACAAATATTTATGTGATGACAATAATGGCTCTAAGGGAGGCTTCTTGCTGAAGAAGCAGGCTCAGAAGATTACTATAAAAGATTTATCAGAGGATGACTTGAGAGAAGCTGCGAAGAAAACGGAGGGATTTTCTGGGCGTGAGATCGCCAAACTCATGGCTAGTGTCCAAGCTGCTGTCTATGGGCGCCCAGACTGCATATTGGATTCGCAGTTGTTTAAAGAGATTGTAGATTACAAAGTGGTGGAACATCACCAACGACTAAAACTAGCAGCTGAAGATGAAGCAGATTTAGAAGAATCTTCCCGGCTTTATTAA 1908 0.4534 MAAARLTSYVAVTSAAVVSMSTFSDRAYADSSFRFPFFSSSPSNAPSPPNQSSDNNSEPPAPEEPNKSGFDPESLERGAKALREINSSSYSKQVFDLMRKQEQTRLAELDAERVHYELIQSQGDIERQRKMAEEQRNLIQEQAQRQAQVLRFEDELARKRMQTDHEAQRLRNVELVKMQEESSVRKERARQATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEEHNRRMLIERLQGERDKWLAAINTTFSHIEGGLRALLTDRDKLIMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSKIISQAKNKLLHSSTLAGAEKPIGSKNGLGNVILHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARRSGLDYAMMTGGDVAPLGAQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSSLMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLDKYLCDDNNGSKGGFLLKKQAQKITIKDLSEDDLREAAKKTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFKEIVDYKVVEHHQRLKLAAEDEADLEESSRLY 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01959 635 Coils Coil 125 145 - -
Viun2g01959 635 SMART AAA_5 385 518 IPR003593 GO:0016887
Viun2g01959 635 MobiDBLite consensus disorder prediction 180 210 - -
Viun2g01959 635 Gene3D - 342 516 IPR027417 -
Viun2g01959 635 MobiDBLite consensus disorder prediction 40 73 - -
Viun2g01959 635 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Viun2g01959 635 Pfam ATPase family AAA domain-containing protein 3, N-terminal 53 317 IPR021911 -
Viun2g01959 635 PANTHER PUTATIVE ATP-ASE 20 625 - -
Viun2g01959 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 628 IPR027417 -
Viun2g01959 635 MobiDBLite consensus disorder prediction 40 62 - -
Viun2g01959 635 Coils Coil 183 217 - -
Viun2g01959 635 Gene3D - 517 632 - -
Viun2g01959 635 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Viun2g01959 635 FunFam ATPase family AAA domain-containing protein 3 343 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01959 Viun-Chr2 28178313 28183560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01959 365 592 Miscellaneous Gene Families AT5G53170 29.289 4.30e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01959 K17681 - gmx:100776095 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01959 2 28178313 28183560 Viun2g01959 2 28178313 28183560 ECH