Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01921 ATGGGATTGTACTCCAAGAACCTTTTTTCTTCGTTTACATCGGCATCGTCATGGTTCGAGGTGTATGCTGCGTTCTCCACACTCATGATACTCCTCAGAACAGCAATCAATGATCTCATACCCCATCAGTTTCGATCCTTCGTCATCTCAAAGCTAGAGGGCTTCTTCAAATACCAACCACATAGCATAGTCTCTATCAAAATTAATCAATTTTGGGATGAAGGTAACCACGAGCGCAACGAACTTTTCGATGCTGCCCTGGCGTACCTCCCCACCAAGATTACTCACACCTACAAATCGCTCAAAGTTGGCAGACCGCAAAACCAGAAACACATCGAGCTTGCGGTGGATGGAAGTGAAGACGTGATGGACGAATTTGAAGGCGTCAAATTCACTTGGAAGCTGGATGAAGGGTCCAATGAGGAGTCTAGCTTCAGGAAGTTGAACTTTGTATTAGCCTTCAATGAGAAACAGAGACAGAGGGTACTGGATCGCTATATCCCACATGTGTTTAAAACATACGAGGCCATGAAAAATGAGAGAAGGATTCTAAAGTTGTATTCCAGAATACGTGGCTATTGGAACGAAAGTGAGTTATCACATCCTGCCACATTTGACTCACTAGCCTTGAGTCCTGAGCTGAAGAACGATATCATTGATGATTTGGATCGGTTCTTGAGGAGGAAGGACTTTTACAAGAAAGTGGGCAAGCCTTGGAAGCGTGGCTACTTGTTGTATGGACCCCCCGGAACTGGAAAATCTAGCCTTATTGCAGCCATCGCAAACCACTTGAAATTCGACGTGTATGATTTGGAGCTTTCGTCCATCGACTCTAACTCGGAACTCATGCGGGCCATGAGGGATGCATCTCACCGTTGCATCATTGTGATTGAAGACATAGACTGCAACAAGGAGGTCCATGCAAGATCAAAACCAAATGCTACTTCAGAGGATCGAGATTCAGAGTCTGAGAATGAGGGTTCAAAGATGAAGTCAGAGAAGTTTACTCTGTCGGGTCTGCTTAACTACATGGACGGTTTGTGCTCGAGTGGTGGAGAGGAGCGGATTGTAATCTTCACTACTAACCACAAAGAGAAAATTGACCATGCATTGCTGCGCCCTGGTCGAATGGACATGCACATTCACTTGTCCTTCCTCAAAGGCAAGGCCTTTCGAGTGTTGGCTTCCAATTATCTAGGCATTGAAGGAGATCATCCACTCCTTCACCAAATTGATGATCTGTTGGAGAAAATTGAAATCACCCCTGCAGTGGTAGGAGAACAACTGTTGAGATATGAGGATCCTGACCTTAGTTTGGAAGAACTTGTTCAATTTCTCAAACAAAAGGTGAAGGTCAAGGATAGGAATTGTGACTGA 1377 0.4481 MGLYSKNLFSSFTSASSWFEVYAAFSTLMILLRTAINDLIPHQFRSFVISKLEGFFKYQPHSIVSIKINQFWDEGNHERNELFDAALAYLPTKITHTYKSLKVGRPQNQKHIELAVDGSEDVMDEFEGVKFTWKLDEGSNEESSFRKLNFVLAFNEKQRQRVLDRYIPHVFKTYEAMKNERRILKLYSRIRGYWNESELSHPATFDSLALSPELKNDIIDDLDRFLRRKDFYKKVGKPWKRGYLLYGPPGTGKSSLIAAIANHLKFDVYDLELSSIDSNSELMRAMRDASHRCIIVIEDIDCNKEVHARSKPNATSEDRDSESENEGSKMKSEKFTLSGLLNYMDGLCSSGGEERIVIFTTNHKEKIDHALLRPGRMDMHIHLSFLKGKAFRVLASNYLGIEGDHPLLHQIDDLLEKIEITPAVVGEQLLRYEDPDLSLEELVQFLKQKVKVKDRNCD 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01921 458 Gene3D - 382 454 - -
Viun2g01921 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 432 IPR027417 -
Viun2g01921 458 PANTHER BCS1 AAA-TYPE ATPASE 23 451 - -
Viun2g01921 458 Pfam ATPase family associated with various cellular activities (AAA) 244 383 IPR003959 GO:0005524|GO:0016887
Viun2g01921 458 CDD RecA-like_BCS1 218 383 - -
Viun2g01921 458 MobiDBLite consensus disorder prediction 308 331 - -
Viun2g01921 458 Pfam Domain associated at C-terminal with AAA 40 135 IPR025753 -
Viun2g01921 458 Gene3D - 195 381 IPR027417 -
Viun2g01921 458 SMART AAA_5 239 387 IPR003593 GO:0016887
Viun2g01921 458 ProSitePatterns AAA-protein family signature. 355 373 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01921 Viun-Chr2 27952670 27954394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01921 232 429 Miscellaneous Gene Families AT3G02450 30.144 8.38e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01921 - K08900 gmx:100789094 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01921 2 27952670 27954394 Viun2g01921 2 27952670 27954394 ECH