Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01907 ATGTTTGGGAATGAACGAAGCATGTTGACGAGGGTGGTACCCGTAGCTAGGTTCATTTCTAGGAGGTTACGAGCAGTGCGGCAAGTGCATGGAGATGGAGATGGAGATGGTGATGGCGAAGGGCGTTTACATTTTCACAAGAGCAAAGGTCAACACATTCTCATCAACCCTAGAATTCTTGATACCATCGTTCGCAAATCCGCCATAAATCCAACCGACACTGTCCTCGAAATCGGACCTGGCACCGGCAACCTCACCATCAAGCTTCTTGAAGCTGCTCACAAGGTAGTAGCATTCGAAATTGACCACCGCATGGTCCAGGTTCTCGTGAAGCGCGCTCTTCGACAAGGTCTCAATGATAAGCTCAGGGTTATAAAAAAAGATGCAGTGAAAGCCCTGTTTCCGCGGTTTGACCTTGTTGTGGCCAACATTCCTTATCAGATATCTTCCCCTCTCGTGATGAAACTGGTGTATGGGGCGACGCCGTTTCGGAGTGCCACGCTTCTTCTTCAGAAAGAGTTCGCTCAAAGGTTGGTGGCAAATCCTGGTGACTCTGAGTTTAGCCGGCTGTCGGTGAATGTGAAGCTTCTGGCTGATGTGGAGCTTGTGATGAATGTAAGCAAGAGGGACTTTCTCCCTTCCCCCAAAGTTGACTCTTCTGTGGTCATAATCCGCCCTAAGCCTCAGGTTCCCAATGTGGATCTCCGTGAGTGGAGGGCTTTCACATCGAACTGTTTTAATAACCGTTACAAGACACTGGGGGCAACTTTTAAGAATAAAAGGAAAGTCTTTGAGTTGCTCAAAATCTCTAATGAAAACGATAAAGCTTCTTCCCACAAGGGTGATGATGCTGAAGATGAAGTAGGCTTTACCTCGTTCAAGGAAAAGATTATTGGGGTGCTTAGAACCGGAGAGTTTGAAGATAAAAGGCCTGCAAAACTTTCTATCGAGGAGCTTCTGCATTTGCTCTCTTTGTTCAATCAAGCTGGCATTTATTTTTCAAACCATGGTCATCTGAAGAGGGAAGATAGGTTTGATGATGCCGATGAATAG 1053 0.4653 MFGNERSMLTRVVPVARFISRRLRAVRQVHGDGDGDGDGEGRLHFHKSKGQHILINPRILDTIVRKSAINPTDTVLEIGPGTGNLTIKLLEAAHKVVAFEIDHRMVQVLVKRALRQGLNDKLRVIKKDAVKALFPRFDLVVANIPYQISSPLVMKLVYGATPFRSATLLLQKEFAQRLVANPGDSEFSRLSVNVKLLADVELVMNVSKRDFLPSPKVDSSVVIIRPKPQVPNVDLREWRAFTSNCFNNRYKTLGATFKNKRKVFELLKISNENDKASSHKGDDAEDEVGFTSFKEKIIGVLRTGEFEDKRPAKLSIEELLHLLSLFNQAGIYFSNHGHLKREDRFDDADE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01907 350 Gene3D - 231 334 - -
Viun2g01907 350 CDD AdoMet_MTases 74 157 - -
Viun2g01907 350 PANTHER DIMETHYLADENOSINE TRANSFERASE 41 328 IPR001737 -
Viun2g01907 350 ProSitePatterns Ribosomal RNA adenine dimethylases signature. 75 102 IPR020596 GO:0000154|GO:0000179|GO:0008649
Viun2g01907 350 NCBIfam 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 45 324 IPR011530 GO:0000179|GO:0006364
Viun2g01907 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 328 IPR029063 -
Viun2g01907 350 Pfam Ribosomal RNA adenine dimethylase 44 272 IPR001737 -
Viun2g01907 350 Gene3D Vaccinia Virus protein VP39 45 229 IPR029063 -
Viun2g01907 350 ProSiteProfiles rRNA adenine N(6)-methyltransferase family profile. 45 330 IPR001737 -
Viun2g01907 350 FunFam rRNA adenine N(6)-methyltransferase 45 229 - -
Viun2g01907 350 SMART rADcneu6 59 228 IPR020598 GO:0000154|GO:0000179|GO:0008649
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01907 Viun-Chr2 27832963 27834809 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01907 K14191 - gmx:100790908 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01907 2 27832963 27834809 Viun2g01907 2 27832963 27834809 ECH