Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01752 ATGGCGGTTCCTTTCAGAATGAACCATAACAAACATGGCATGCTTGCTCGTTTGAAGACTCTCGTCAACTCTCAGAACTTTCACTCACCTGCTCCCAAACCGGGCAAACAATCAAAGCAAGACAGACCGTCTCCAAAACAAGACTTGGACTACTCTATTTGCCGAGATCGCATAGGCATATCAGAATCGAAGACTTTGGATGCAGAGGAGCTTGGTGTAACTAGTTCTATGATTTCACACTCATCTATGTTTGTCCTGAAACTTCTTCGGAGCAAAGGATTTGAGTCCTACTTAGTAGGTGGGTGCGTGAGAGATCTAATACTCAATAGAACTCCAAAAGATTTTGATGTTATCACCACAGCAAAGCTTATGCAGGTGAGAAATCATTTTCGTCATTCAGTTCATGCTGAAATTGTTGGCCGTCGTTTTCCAATATGCTTGGTTCATATTAAAGGTTCTGTAGTTGAGGTAACTAGTTTTGAGACAGTGGCACGAACTTCCAATGTGAAGGAACAATTTTTGTACTCTCAGTTGCCCAAATGCAGTAATAAAAAAGACCTATTTCGCTGCAAAAACTCCTTGCGTAGAGACTTCACAATTAATAGTTTATTTTATGACCCCTTTGCCAATAAAATCTACGATTATACCAATGGAATGGCAGATTTGAGGACTTTAAAGCTAGAAACTGTTATCCCTGCTCAGCTGTCCTTCAAAGAGGATCCAGGAAGAATTTTGCGTGGCTTCAGACTTGCAGCTCGGCTAGGTTTATCATTATCAAGGGACATTGAGGCTGCATTCTGGGCGTATTCTTCACTAGTTATGAACTTGGACAAGAATAAAATTATGATTGAATTGAACTATATGCTGTCTTATGGAGCTGCTGAACCATCTCTGCGTCTACTTTGGAAATTCAAATTGCTTAAATTTTTACTTCCTTTACATGGAGCATATCTAGATGAAAAGGCTATTGAAGAAGATGATCAAGCTTCCAATATGTTGTTAAAGTTATTCTTTCATCTGGATAAGTCGCTTGCTTGCGATCGACCTTGTGATTGTACTCTGTGGATTGGATTGCTTGCATTTCACCTGGCATTAGTAAATGATCCTCAAGATCCCCTAGTGGTGTGGGCTTTTGCATCTGTTCTATATCATGGAGAGTGGAAAAAAGGTGTTAAATTTGCTAAAGAACAGGCCGGAATGAGTGTTAATTTTGTACCTGAAATAAGAAAGTGTAATATATACAAATCAGATGAAGAAATTGCAATGGCAGTTACTAAATTGGCATCTTTGGTGATGCGCTCGACACATGCATTGGTTGAAAAAACTAGTCTTCATCACTTCATGTGCATGCCTAGATACTCATCTTCTCCACAATCTGACATGGTATTTGTATCCAGGAAAGCAGGGCAGCGTGCTCAGACAATTTTCAAAAGGCTGGCCAATGATGGTAAATTTTACACGAGTGGAAGAAGAAAAAATTTGAAGATAAATTATGACATGCTTGGGAAGGGTGAACTTTCAGAGACTGGATTTGTTTTGGGCAAAATTGTACTTGAAACTATGAGTAGTGGAATTGTTGGGGATGGGGAGGATTCTGAAGCTGGACAATGTCACCTAAAGACTAAGGGCACTGAAGAAATTGGTCTATCGCCACATCCAGATCTGGTAAACCATCAAGTGGCGTCAATGGATGGTGAAGGACAACTTTTATCAATACCAAATTCAGAATGCGGGCAAGGAAAAAACAAGAAACGGAAACTGGTTAAGGATAGTTGTATTGCAAGGAAGAAAATGGGCTCGGGGAACCATAAATTGTCTGTGGAATATGAATGCAAGGAAAATAAAAAAGAGCAGCAGAAGGTAGTTAAGTTAAGCCAGAAGGCTGATCCATCCTTGACGAAGGACTCCACAGAAAACAATATTTATCTCAGAAAACAGCTGACAAATAATAGGAAGAAAATAACCAGTGCCAATACATTTCTAGACCAAGCTATGCAAATGAAGACGGATGAATACAGCACATGTACGGCGTCACAATCTGCAGAATCTGATAATCATCAGGTGATAGCTCACAACTTGGACATGGATGCAAAAACAACAGATAACAACCTGGACGTGGATGCAAAAACACCAAATGAGTCGGACTTGAAGAAGAAAATAATGAGATTATCAATGATTGAACTCTTTAAAGTGAAGTAA 2199 0.3956 MAVPFRMNHNKHGMLARLKTLVNSQNFHSPAPKPGKQSKQDRPSPKQDLDYSICRDRIGISESKTLDAEELGVTSSMISHSSMFVLKLLRSKGFESYLVGGCVRDLILNRTPKDFDVITTAKLMQVRNHFRHSVHAEIVGRRFPICLVHIKGSVVEVTSFETVARTSNVKEQFLYSQLPKCSNKKDLFRCKNSLRRDFTINSLFYDPFANKIYDYTNGMADLRTLKLETVIPAQLSFKEDPGRILRGFRLAARLGLSLSRDIEAAFWAYSSLVMNLDKNKIMIELNYMLSYGAAEPSLRLLWKFKLLKFLLPLHGAYLDEKAIEEDDQASNMLLKLFFHLDKSLACDRPCDCTLWIGLLAFHLALVNDPQDPLVVWAFASVLYHGEWKKGVKFAKEQAGMSVNFVPEIRKCNIYKSDEEIAMAVTKLASLVMRSTHALVEKTSLHHFMCMPRYSSSPQSDMVFVSRKAGQRAQTIFKRLANDGKFYTSGRRKNLKINYDMLGKGELSETGFVLGKIVLETMSSGIVGDGEDSEAGQCHLKTKGTEEIGLSPHPDLVNHQVASMDGEGQLLSIPNSECGQGKNKKRKLVKDSCIARKKMGSGNHKLSVEYECKENKKEQQKVVKLSQKADPSLTKDSTENNIYLRKQLTNNRKKITSANTFLDQAMQMKTDEYSTCTASQSAESDNHQVIAHNLDMDAKTTDNNLDVDAKTPNESDLKKKIMRLSMIELFKVK 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01752 732 Gene3D - 227 477 - -
Viun2g01752 732 SUPERFAMILY Poly A polymerase C-terminal region-like 227 371 - -
Viun2g01752 732 Pfam Poly A polymerase head domain 97 226 IPR002646 GO:0003723|GO:0006396|GO:0016779
Viun2g01752 732 SUPERFAMILY Nucleotidyltransferase 72 223 IPR043519 -
Viun2g01752 732 Gene3D Beta Polymerase, domain 2 63 224 IPR043519 -
Viun2g01752 732 MobiDBLite consensus disorder prediction 25 49 - -
Viun2g01752 732 CDD NT_ClassII-CCAase 87 223 IPR002646 GO:0003723|GO:0006396|GO:0016779
Viun2g01752 732 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 28 538 - -
Viun2g01752 732 Pfam Probable RNA and SrmB- binding site of polymerase A 255 314 IPR032828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01752 Viun-Chr2 26844322 26851963 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01752 - - gmx:100794882 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01752 2 26844322 26851963 Viun2g01752 2 26844322 26851963 ECH