Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01736 ATGAGCGAATCTCAAGACCTATTATCCTACCCTCCCATAGACCCTGTCAACTTCGATCTCATCATCGTCGGCACCGGCCTATCTGAATCCATCGTCGCCGCGGCCGCTTCAGCCGCCGGCAAAACTATCCTCCACCTCGATCCCAACTCCTTTTACGGCAGCCACTTCGCCTCTCTCTCCTTCCTCGACTTCACTTCCTACCTCACTTCCCCAAACCCTCTTCCCGCCGCCGTCACAACCACCGACTCCGAAGACGTTGTTGTCGATCTCCTCCACCAACCCATCTGCTCCGACGCGGAAATCTCATGCTATGATGAATACTCGTTCCTCTGCGAAAATTCGAGAAAATTCAACATCGATTTGGGAGGTCCGAGGGCGCTGTTCAGCGCGGACAGGACGGTCGATCTGCTGTTGAAATCTGGTGCGGCGCAGTATTTGGAGTTCAAAGGAATCGATGAAAGCTTCGTGTACGAACCGAATGGGGGTTTGGCGAACGTGCCGGATTCTCGCGGAGCGATTTTCAGAGACAAGAAGCTTTCGCTGAAGGAGAAGAACCAGTTGATGAGGTTCTTCAAGCTGGTTCAGCAGCACTTGGATGATACTCAGGAGGAGAAAATTTCGGAGGAGGATATGGAGATTCCTTTTGTTAGTTTCTTGGAGAAAATGAAGTTGCCGCCTAAGATAAAATCGATTCTTTTGTATGCTATAGCCTTGGTAGATTATGATCAAGACAGTAACGAGGTTTGTAAAGATTTGCTTAAAACAAAAGATGGAATAGATTGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCTAATGCTCCTGGTGCTTTGCTTTATCCTATTTATGGTGAAGGAGAACTACCACAAGCCTTTTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTAAGAATGCCAGTTGTTTCGCTGCTTATGGATAAGGCTACTGGGCTTTATAAAGGTGTTAGGTTAGCTTCAGGTCAAGATTTATATAGCCAGCAATTGATTCTGGATCCATCCTTCACTATTCCATCACCGTTGTCTTTGTCACCGAGAGATTTTCCCTGTGAAAGGCTCCAAATGTGGAGTCAGAGAGATATTAAAGGAATGGTGGCTAGGGGAATATGCATCACAAGAAGTTCAATAAAACCAGCTGTAACTAATTGCTCAGTGGTGTATCCTCCTAGATCTTTGTATCCTGAACAGATGACATCAATCAAATCTCTTCAGATAGGACCAAATCTTGCTGTTTGTCCTGAGGGAACCTTCATTTTATATTTTTCCACTTTGTGCAATAATGCTGATGAAGGAAAGAATCTACTAAAAGCAGCCATGAATGCTCTTCTCACACTGCCTGTATCCGGAAACACTGAAAGTGTTTCGAGTGTTCAAAGTGACAGTGAAGATACTAAACCGATTGTGCTCTGGAGTGCATTGTATATTCAGAAATTAATTGTGAGTAATTTTGAATTGATCAGCTCCTCTTCTACACCGGATGGAAATCTGAACTACAATGACCTTTTAGATGCAGCTGAGAAGCTCTTTCGTCAGATGTTCCCCAATGAAGAATTCTTTCCAAAGGTAACAACATCACCCGAAGAACCTACAGATGAGGATGATAATGGGTTAACTCTGGATAGCTAA 1653 0.4465 MSESQDLLSYPPIDPVNFDLIIVGTGLSESIVAAAASAAGKTILHLDPNSFYGSHFASLSFLDFTSYLTSPNPLPAAVTTTDSEDVVVDLLHQPICSDAEISCYDEYSFLCENSRKFNIDLGGPRALFSADRTVDLLLKSGAAQYLEFKGIDESFVYEPNGGLANVPDSRGAIFRDKKLSLKEKNQLMRFFKLVQQHLDDTQEEKISEEDMEIPFVSFLEKMKLPPKIKSILLYAIALVDYDQDSNEVCKDLLKTKDGIDCLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVVSLLMDKATGLYKGVRLASGQDLYSQQLILDPSFTIPSPLSLSPRDFPCERLQMWSQRDIKGMVARGICITRSSIKPAVTNCSVVYPPRSLYPEQMTSIKSLQIGPNLAVCPEGTFILYFSTLCNNADEGKNLLKAAMNALLTLPVSGNTESVSSVQSDSEDTKPIVLWSALYIQKLIVSNFELISSSSTPDGNLNYNDLLDAAEKLFRQMFPNEEFFPKVTTSPEEPTDEDDNGLTLDS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01736 550 PIRSF Rab_ger_ger_transf_A_euk 1 93 IPR001738 GO:0005968|GO:0006886|GO:0018344
Viun2g01736 550 PIRSF Rab_ger_ger_transf_A_euk 79 549 IPR001738 GO:0005968|GO:0006886|GO:0018344
Viun2g01736 550 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 531 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 SUPERFAMILY FAD-linked reductases, C-terminal domain 371 490 - -
Viun2g01736 550 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 166 278 - -
Viun2g01736 550 Gene3D - 15 527 IPR036188 -
Viun2g01736 550 Pfam GDP dissociation inhibitor 17 91 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 Pfam GDP dissociation inhibitor 113 449 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 MobiDBLite consensus disorder prediction 528 550 - -
Viun2g01736 550 SUPERFAMILY FAD/NAD(P)-binding domain 16 347 IPR036188 -
Viun2g01736 550 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 94 487 - -
Viun2g01736 550 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 PRINTS Rab GDI/REP protein family signature 133 149 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 PRINTS Rab GDI/REP protein family signature 183 198 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 PRINTS Rab GDI/REP protein family signature 285 306 IPR018203 GO:0005092|GO:0007264
Viun2g01736 550 FunFam Rab proteins geranylgeranyltransferase component 166 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01736 Viun-Chr2 26752471 26757565 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01736 K23460 - gmx:100795946 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01736 2 26752471 26757565 Viun2g01736 2 26752471 26757565 ECH