Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01728 ATGTTCGTGAAGAAACTCGTGGAGAAAGCATCCATAAAGAAGGGTGTTGGAAATTCAGTGGATGGGTTAAAAGCTAGTGATGTAGAACCACGTTTGGTGTTTCATCAAGGGATTCCATCTGGTGGTACCAAGTTTGCCTATGACAACATTAAGAAGATTCTTGCTCTTTCCACCAAGGATGGTCGGATTAAACTATTTGGAAAAGATAATGCCCAAGTCCTACTTGAATCTAGAGAGCCAGTGCCTAGTAAATTTTTACAGTTCATTCAGAACCGAGGCATCCTTATAAATGTCTCTTTCAATAATCATATTGAGGTTTGGGACATAGACAAGAAACTGCTCGTTGACGTGTTCATTGTTAAAGAAGAAATCACCTGTTTTTCGGTTCTTCAACACAGCCTCTTCATGTTCATTGGATTTTCTAATGGTAATATTGCAGTTTTAAGTCTTGATCAAGAACCATGGCATGTGGTAAGGATGAAATACTCCATACCCCTTTCAGCTTCCTATGGAAATTCAACAGAAGAATCTGATGATACTGTTGTCACGCATGTACTGCCTCAACCAGCAGCCGAGAGTCAGAGAGTTCTCATAATCTTTAGAAATGGCCAAATAATATTGTGGGATATTCGAGAAAGCAGGTCCATTTTTAGAACCGGAGGAAGAATGTTACAAGCACGGTATAATGAAACAAAGAAAGTGTCTTGTGCATGTTGGGTATGTCCTTTCGGAAGTAAGGTGGTTGTAGGGTACAACAATGGAGAGCTCTTCATTTGGAGCATTCCTACTCTAAACACAGGAAATAATTTAACAGCTGATTATAGCAGTCAAAATACTCCAATGTTCAAGTTTAACTTAGGATATAAATCAGACAAAACTTCAATAAGATCAGTAAAATGGATTTATGCAGAAGGAAGAGCCAGTCGATTATACGTTATGGGAGGTTCTGATCATGCCCCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAGCATACAGAATCTCGCACAATTAAGATGGGGCTTCATTTGTCAGAAGGTTCTGTTGACATGGAGATCATATCAACCTCAAGCAAGCAGAGACAAAATTATTTCATTTTGCTTGGGAAATCAGGAAACGTATATCTGTATGATGATAATTTGATTGAAAAATATCTGTTGCAGAGTCAGTCTAAGTCCACTCCTTCACTGCCAAAGGAAGTGCTTGTGAAGTTACCACTGTCAGATTCAAGCATCACTGCAGCAAAATTCATCTCCAACAATCCCAATTTGTTTAGTTCTGAAGACGAGTATTACAGCCAGCTGGTGAAGAATTATCCACCACTTATTCCCATTGAAACAAATCTCAAAGATGGGATTAACTTCAGTGCTGCCAATTTCACTGGATTTTCGAACTTAAGAAACTTGTACATAACTGGACACAGCAATGGAGCCATAACTTTTTGGGATGCGTCATGTCCCTTTTTTACCCCAATTTTGCAATTAAAGCAACAGGCTGAAAATGATGTTTCTTTAAGTGTTGTACCCTTGACAGAATTATATTTTGATAGCAACTCTCCACTCCTCGTTTCTGGTGACCAAAGTGGGATGGTTCGTATCTACAGATTCAAACCTGAACCATATGCATCCAACAGCTTCATGTCTCTTACTGGAAATACAAAGAAAGGGACTGATCATGTAATCCACAGTATGAAACTAGTAAAAACTAGTGGTGCTGTAATTTGCATGAACATGGATCATAACTCAAGGCACCTTGCTGTTGGTTCTGACCAAGGAAACGTTTCAGTCATTAACATAGATGATCCATCTTTGTTATACCGGAAAAACATTTCAAGTGAAATTTCCTCCAGTATCGTCTCATTGCAGTTTAAAACCTGCAGTTTGCGTGGTTTTGAGAAAAACATTTTACTAGTTGGAACAAAGGACTCCTCTGTTGTAGCACTAGATAGTGAAACTGGAAATCCATTGAACACTGAAGCTATTCACCCTAAGAAGCCCTCTAAAGCCATATTTATGCAAGTGTTGGATGGAGTAGCAGAACCAATCACAGGATCTGTTACAAAAGATGGCTTAGACTCAAGAGAAGGGAATCGTACTGAAGATGCAACAGCAAAGCAATTGTACATTTTGCTGTGTTCTGAGAAGGCTTTGTATGTCTATTCTTTTGTGCATGCTGTACAGGGAGTTAAAAAGGTGCTTTACAAGAAGAAATTTCATTCCTCTTCCTGTTGCTGGGCATCAACAATTTACAACGTCTCTGATATCAGTCTTATTCTCCTTTTCACCAGTGGGAAAATGGAATTAAGGTCTCTGCCAGCGTTATCTCTGATAGTGGAGACTTCAATTAGAGGTTTCACTTATTCACCTCCAAAACTGAAGTCATATTCTGATAGCCATATATGTTGTTCACCCAAAGGAGATATTGTTTTGGTGAATGGTGATCAGGAAATTTTTGTTGTCTCATTGTTGGCCCAGAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACCGAAAGGAAACAATGTCATCAGCAGAAGAGCTTGTTCCAGGCCCTGTAATCGACAAGGAAAAGAAAAAGGGTATACTCAGCTTCGTTATAAAAGATTTTACAAGTAGTAAACAAAAGCATGGGCCCCTCATGGGTAAAGAAGATCCCAAAGAAAACATACGAGAACTCTCAGCAGTATTCTCAAATGCGAACTTTGCATGTTATGATAATGATGATAAACCAACAGTGGATGAAAGTGAGCTTGAATTAAACATAGATGACATTGACTTAGAGGATCATGGAGAAAAACACAAAGAACAAAGCATATTAGGAGCTCTTAATAAGAAGAAATTGGTTGGAAAATTTCAGTCTCTGAAAGGAAGATTGAAAGAAATGAAAGGAAACTACCAGAAGGCATCAGATAAGGAAGGGCACCAGGGGGAAAAAGATGGTGCGCTGGATCAAATTAAGATGAAATATGGATTTTCTTCTTCTTCCAATTCTGGTGCTTCAGGAAACAACCGCTGCTAA 3027 0.3885 MFVKKLVEKASIKKGVGNSVDGLKASDVEPRLVFHQGIPSGGTKFAYDNIKKILALSTKDGRIKLFGKDNAQVLLESREPVPSKFLQFIQNRGILINVSFNNHIEVWDIDKKLLVDVFIVKEEITCFSVLQHSLFMFIGFSNGNIAVLSLDQEPWHVVRMKYSIPLSASYGNSTEESDDTVVTHVLPQPAAESQRVLIIFRNGQIILWDIRESRSIFRTGGRMLQARYNETKKVSCACWVCPFGSKVVVGYNNGELFIWSIPTLNTGNNLTADYSSQNTPMFKFNLGYKSDKTSIRSVKWIYAEGRASRLYVMGGSDHAPSNLLQVVLLNEHTESRTIKMGLHLSEGSVDMEIISTSSKQRQNYFILLGKSGNVYLYDDNLIEKYLLQSQSKSTPSLPKEVLVKLPLSDSSITAAKFISNNPNLFSSEDEYYSQLVKNYPPLIPIETNLKDGINFSAANFTGFSNLRNLYITGHSNGAITFWDASCPFFTPILQLKQQAENDVSLSVVPLTELYFDSNSPLLVSGDQSGMVRIYRFKPEPYASNSFMSLTGNTKKGTDHVIHSMKLVKTSGAVICMNMDHNSRHLAVGSDQGNVSVINIDDPSLLYRKNISSEISSSIVSLQFKTCSLRGFEKNILLVGTKDSSVVALDSETGNPLNTEAIHPKKPSKAIFMQVLDGVAEPITGSVTKDGLDSREGNRTEDATAKQLYILLCSEKALYVYSFVHAVQGVKKVLYKKKFHSSSCCWASTIYNVSDISLILLFTSGKMELRSLPALSLIVETSIRGFTYSPPKLKSYSDSHICCSPKGDIVLVNGDQEIFVVSLLAQRNIFRLLDSVSCIYRKETMSSAEELVPGPVIDKEKKKGILSFVIKDFTSSKQKHGPLMGKEDPKENIRELSAVFSNANFACYDNDDKPTVDESELELNIDDIDLEDHGEKHKEQSILGALNKKKLVGKFQSLKGRLKEMKGNYQKASDKEGHQGEKDGALDQIKMKYGFSSSSNSGASGNNRC 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01728 1008 Gene3D - 444 675 IPR015943 GO:0005515
Viun2g01728 1008 Coils Coil 954 974 - -
Viun2g01728 1008 FunFam Syntaxin-binding protein 5 isoform A 185 434 - -
Viun2g01728 1008 Pfam Lethal giant larvae(Lgl) like, C-terminal 727 828 IPR013905 -
Viun2g01728 1008 SUPERFAMILY WD40 repeat-like 45 538 IPR036322 GO:0005515
Viun2g01728 1008 Gene3D - 40 380 IPR015943 GO:0005515
Viun2g01728 1008 SMART WD40_4 557 598 IPR001680 GO:0005515
Viun2g01728 1008 SMART WD40_4 398 483 IPR001680 GO:0005515
Viun2g01728 1008 SMART WD40_4 500 535 IPR001680 GO:0005515
Viun2g01728 1008 SMART WD40_4 111 149 IPR001680 GO:0005515
Viun2g01728 1008 SMART WD40_4 221 260 IPR001680 GO:0005515
Viun2g01728 1008 FunFam Syntaxin-binding protein 5 isoform A 23 182 - -
Viun2g01728 1008 SUPERFAMILY WD40 repeat-like 463 827 IPR036322 GO:0005515
Viun2g01728 1008 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 6 999 - -
Viun2g01728 1008 MobiDBLite consensus disorder prediction 965 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01728 Viun-Chr2 26734964 26744250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01728 - - gmx:100782049 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01728 2 26734964 26744250 Viun2g01728 2 26734964 26744250 ECH