Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01722 ATGACGGCCAGCATAAAGCCTTTGCAAGAGGCAGTACGTAGTTCACTCCGTTCTGGCATTTTCTTGTTCGACTTCACGCGCGTCGTCGAGGAACTGGTTTTCAATAGCCTCGATGCTCGTGCCACAAAGGTATCAGTGTTTGTTGGTGTTGGGAGATGCTATTTGAAAGTAGTTGATGATGGAAGTGGAATTACTCGAGATGGACTTGAGTTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTAATTTGGTTGACCTGAATGTTACGAGTGAGAATTTCGGTTTCCGTGGGGAGGCTTTGGCTTCCATTTCTGATGTCTCTGTGCTGGAAATTGTGACAAGAACTCATGGAAGGCCAAATGGATATCAAAAAGTGTTGAAGGGATGCAAGTGTTTATATCTTGGCATTGATGATGATAGAAAGCAAGTGGGCACCACAGTTGTCGTCCGTGATTTATTTTACAATCAACCAGTTCGGAGAAAATGCATACAGTCCAGTCCCAATAAGGTACTGCAATCAATCAAGAAATGTGTAATGCGACTTGCACTTGTGCGTCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATGAACTCTTCTGCACACATTCTGCTTCTTCTCCTCTGTCACTTGTAACCAGTGGCTTTGGGGTAGAGGTCACAAGCTCTCTTCACTATTTAGAAGTTGAGAATGATATCATAAAGCTTTCTGGATATGTATCCAGTCCTTGCAATATTTTAAACATGGAGGTCCTGCAGTATGTCTATGTTAACTCACAATTTGTTTGCAAGGGCCCAATTCATAAGCTTCTGAGTCAACTGGCTATCAGGTTTGAACATCTGAACTCATGGACTACTGCCAATGAGTTCCGAAACAAGAAGAGAAGCAGGTGTCACCTGGGTCCGGCTTATCTCTTGAATTTAAGTTGCCCCCGATCTATGTATGATTTGGCCTTTGAGCCATCAAAAACGTATGTTAAATTCAAGGATTGGACACCTATTCTAAACTTCATTGAGAAGGTCATCAAACAATTCTGGGAGGAGAACATAGCTTCTGTAGAGCCCTCCAATCAATCTGCATACATGGTACAAGAACAAGAGAAAGCATATGTCAATGTCATTTCAGACGTACCAGATATATCAAGGTTTAGATACCAAAATCGTAAGGATTGCCCAGATCTATTCTTTTCTACTTCAGACAAGCTAATTGAAGATGACTATCATCAATCTAACAGGGAAGATGTTAGAACCTCCATTGATTACTTGGAGGCCGTGATGTTCAAAGAGAAACAAAGTACAGGAGACTCTCTTTTTCAGACTGGTTATTCTGGCAACTTATTGGATGATTCACATGCCAAGTGCATATCCACTGTGACAAGAAGGCAGAACAGTTTGCTGATTCATGATAGCAGCAGTTCACTGGAAGGAGATAACTTTTTTTATGGTGAAATACCGGCTATAGAAAGTTTAAATGATTGTGTACCTTTTGATGCACCGAGTTGTTCACATGGAAGAAAATTCCATAAAGAAGCTGATGCGACCAGTGAAGCATTTCAAGATGATTTACATTCTAACTGCAATGGGTACAGTTATGATGTAAATATTAATGGGGATTTGCAGAAACCTTTTCTAAAGGGATGCTCTACTCCAGGAAGTATCCTGCTTAAGAAAGATTTCCTTGTAAATGATGGATATGAAATCCAAAGTGATAGCTTTTGTAGCCAGCAGAATACAGGGGATGCTAAGGATTTAAATGATGATGTACCTTTTGATGAACCAAGTTCTTCAAATGGAAGAAAATTCCATAAACAAGCTGATGTGATCAGTGAGTCATTTCAAGATGATTTATGTTATAACTACAATGGGTACAGCTATGATGTAAATATTAATGTGGAGTTGCAGAAACCATTTCTAAAGGGATGCTCTACACTAGGAAGTATCCTGTCTAAGAAAGATTTCTCTGGAAATGATAAATATGAACTCCAAACTGATAGCTTTTGTAGCAAGCAGAATACAGGGGAGGATTATAGAAGTGGTAAGGATTTATTTGTCCATCCCTATCCAGAAGTAAAAAAAAAATTAAAGATGACTAAAAATTCCGATTTTCTTGAAAGAGCATTGGCTGAAGAAAGCTTTCTCCCTTCAGATTTATGCTACTCAGCATCACAAATAGGAAGCTCTGACTTGGATGGGCATCCTCTCTACCCAAAGCCCTCATCTCAAGCACATGCACTGGGTTTTTATCGTTCAACTGGTATCAAAGATGATATTGGAGGAGTATCTAGATGCCTTAAATGGGTCCATCATAAAAATCGTTTTGATGAAAGAGAAAATGAGTGCAATTTCAGCTACAATTCTTCATGGAATACCAACCAGCATCACTGTGCATCAAGTTATGCAAATATTGGATTTAATTTTGATGTTGCTGGTGATTCGGGTGAAATATTCAACAAATTAGGTGACTGCGATGATTTCAGTGACATATATTCTACAAAAAGGTCAGATATGTTAAACAAGGAGCTAGACTGGCTGTTGCCTGAGTCATGTGTTAAAAGATGCAAGATGCCTGACAAGAACAAAGGCAAAACAGATAAATTTAGAAATTCAACTTTGGAGGAAAATCATGAAAGATCTCGAAGAAGCATTTCAGCTCCTCCTTTTTATAGAGGCAAAAGGAGGTTTTTCTCTTTAAATCATCCCTCAGAAATAAAAGCCAAAAGTCAGATTGACCGTGTGTATAACCCTGGCTTCATTCATGAAGAAGCTAGTAATTCTGAAGATCCTCAACAGCCTCCTGTTGCTCGCCACGAAAGCACTAAAGATCTCTTACTGCAAGGATCCAAAATCAATGTGAAACAAACTTCAGAGGTTCTGGGTGCTATGCAGGTTAATGACATAACAGAGATTGAAGAACTTGACAGTTTCAACATTCAAAACTGTGCTCCATTTGGGGAATTGCTCTCTAAGGATGTCCAAGATCCCATAGATTATGGGACTAAGTGGAGGAATTGCTCACCTGATTTTACAAAGAATGATATACAGGCTAATGCTCAATGTCGAAACAATATACTTGACATTTCTTCTGGATTGCATCTTGCTGGAGATTCATTGATTCCAGAAACCATCAGTAAGAAATGTCTTGAGGATGCTAAAGTTTTGCCTCAGGTGGATAAAAAATTCATTCCAGTTGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCAGCAGATGAAAGAATCAGACTGGAAGACTTGCGTCAAAAGGTATTGTCGGGAGAAGCAAAAACAGTAACCTATCTGCATACTGAACTGGAACTGTAA 3333 0.3924 MTASIKPLQEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVGVGRCYLKVVDDGSGITRDGLELVGERYATSKFLNLVDLNVTSENFGFRGEALASISDVSVLEIVTRTHGRPNGYQKVLKGCKCLYLGIDDDRKQVGTTVVVRDLFYNQPVRRKCIQSSPNKVLQSIKKCVMRLALVRPNISFKVVDIEREDELFCTHSASSPLSLVTSGFGVEVTSSLHYLEVENDIIKLSGYVSSPCNILNMEVLQYVYVNSQFVCKGPIHKLLSQLAIRFEHLNSWTTANEFRNKKRSRCHLGPAYLLNLSCPRSMYDLAFEPSKTYVKFKDWTPILNFIEKVIKQFWEENIASVEPSNQSAYMVQEQEKAYVNVISDVPDISRFRYQNRKDCPDLFFSTSDKLIEDDYHQSNREDVRTSIDYLEAVMFKEKQSTGDSLFQTGYSGNLLDDSHAKCISTVTRRQNSLLIHDSSSSLEGDNFFYGEIPAIESLNDCVPFDAPSCSHGRKFHKEADATSEAFQDDLHSNCNGYSYDVNINGDLQKPFLKGCSTPGSILLKKDFLVNDGYEIQSDSFCSQQNTGDAKDLNDDVPFDEPSSSNGRKFHKQADVISESFQDDLCYNYNGYSYDVNINVELQKPFLKGCSTLGSILSKKDFSGNDKYELQTDSFCSKQNTGEDYRSGKDLFVHPYPEVKKKLKMTKNSDFLERALAEESFLPSDLCYSASQIGSSDLDGHPLYPKPSSQAHALGFYRSTGIKDDIGGVSRCLKWVHHKNRFDERENECNFSYNSSWNTNQHHCASSYANIGFNFDVAGDSGEIFNKLGDCDDFSDIYSTKRSDMLNKELDWLLPESCVKRCKMPDKNKGKTDKFRNSTLEENHERSRRSISAPPFYRGKRRFFSLNHPSEIKAKSQIDRVYNPGFIHEEASNSEDPQQPPVARHESTKDLLLQGSKINVKQTSEVLGAMQVNDITEIEELDSFNIQNCAPFGELLSKDVQDPIDYGTKWRNCSPDFTKNDIQANAQCRNNILDISSGLHLAGDSLIPETISKKCLEDAKVLPQVDKKFIPVVAGRTLAVIDQHAADERIRLEDLRQKVLSGEAKTVTYLHTELEL 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01722 1110 SMART DNA_mis_repair_2 215 350 IPR013507 GO:0005524|GO:0006298|GO:0030983
Viun2g01722 1110 Gene3D - 3 209 IPR036890 -
Viun2g01722 1110 Gene3D - 218 356 IPR014721 -
Viun2g01722 1110 Gene3D - 1051 1109 IPR042120 -
Viun2g01722 1110 SUPERFAMILY Ribosomal protein S5 domain 2-like 200 350 IPR020568 -
Viun2g01722 1110 FunFam DNA mismatch repair endonuclease MutL 2 215 - -
Viun2g01722 1110 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 IPR014762 -
Viun2g01722 1110 NCBIfam DNA mismatch repair endonuclease MutL 7 372 IPR002099 GO:0005524|GO:0006298|GO:0030983
Viun2g01722 1110 SUPERFAMILY DNA mismatch repair protein MutL 1053 1095 IPR037198 -
Viun2g01722 1110 Pfam DNA mismatch repair protein, C-terminal domain 219 348 IPR013507 GO:0005524|GO:0006298|GO:0030983
Viun2g01722 1110 CDD HATPase_MutL-MLH-PMS-like 12 199 - -
Viun2g01722 1110 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 121 - -
Viun2g01722 1110 MobiDBLite consensus disorder prediction 861 885 - -
Viun2g01722 1110 Pfam MutL C terminal dimerisation domain 1054 1096 IPR014790 GO:0005524|GO:0006298
Viun2g01722 1110 MobiDBLite consensus disorder prediction 861 886 - -
Viun2g01722 1110 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 3 1094 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Viun2g01722 1110 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 24 203 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01722 Viun-Chr2 26704642 26713191 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01722 K08739 - gmx:100788019 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01722 2 26704642 26713191 Viun2g01722 2 26704642 26713191 ECH