Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01654 ATGGCGAGTGAATTTGGCGCCAACGGTCCTTCAACTCCTCCGTCCAATTCCGCGGAGTCCTTCATTGGCTGCTTCATAAGCTTGATTTCGAAGTGCGAGATTCGCTACGAGGGCGTTCTCTATCTCCTTAACGTCCAGGATTCCACCATCGGCTTGAAGAACGTTAAATCTTATGGAACGGAGGGGAGAAGAAAAGATGCAACACAAGTTCCTCCAAGTGATAAGGTTTATGAATACATTCTTTTCCGTGGAAGTGACATTAAGAATTTGCAGATCAAGTCACCCTCCACATCTTCTAAATCAGAAGAGCAGGTTCTTAGTGATCCAGCTATTATTCAGTCACAATATTCTGGGTCCCCAGGTTCCCCTGCGGCCTCAGTCGGAGGTAGAAATTTGACAGAATCAATTCAAAGGCAAGATACCCCTGAGATATCTAGTAAACCCTTTCCTGTTGGGTTGCCTTCTTATCAGTCGGTAACTGAACTGGGACCTTCAAATTCATCTGCTGCTACTAAAGTTGCCAGTCATCCATCTTTTTCTTCAGCAATGAGTTGGCAAGGGCCTAGTGATTTATCTAGCAGTGGTTCTCATTCTCTGCTACAATCTAGTTCCCTTTACTCCCCACCGATTGCAGCATCTGTAGTTGTGCAGAATCAGATTAAAAATGCAGAACCTCAGTTACCTACAAAGGGGGGATGGACAGGTTTTCCAGAGCGTGGTCTACCTATATCTTCTGCAACGTCTTCTTCTCTTGTTAATCTGACTCATTCGAATTCTCTTACCTCTTTAAAAAATTCTGATTCTCTTGATGTTCCATCCCTTTTGATACCCGTGCCATATTCTGCATCCATGGCTTTTGATGGATCAAACATGCCTCAGTTTTCTTCCCCTTATCAAGACATTTGTCCTGACCCGAGGGCAATTCATCCTCGACATTCTGCTCCTTCATTTGTAGATTCTACTTCAGGTCTCTTGCCAACAACACCATCTTTGTTAACACCAGATCAATTTGCGAATCCTAGAGAACAGTTATTATCTACTACACATAATTTGAACCCTAATCAAAAGGGTATGGGTTCTCTGACTCAAACATCCTTTGGTTCCTCTGCATTGATGCCATTTCCAGCATCTCAAGCACCGCTGCTTCCACTACCTACTTCAGTGCAAAAGCCTCAATACACAGCTCCACAATTCACTGAAGAGTTTGATTTTGAGGCCATGAATGAAAAGTTCAGAAAAGATGAAGTATGGGGCTCTCTTGGAAATGCAACCACAATAGAGGGAGTACAGGATAATACTTCTCTCAATCTGGGTAACAGGGAATATCATGGGATGGTACCAAACCATAAGTCAGCATACAAGAAAGATGACTTTTTTGACACAATTTCCTGTAACTCTTTGACCCGTGGATCAAGGAACGGACAAAATCGTTTCTCCGAGAGAATGAAACAGGATACAGAGACATTTGGCAATTTCCAGCAGAGGCATAATTTTAGTTATGGCGCTGGACGGGGTGAGAATTTCAGGGGCTCATATAATTGGGGAGGAAGGGGTTATGGCTATGGTGGGAGAGGGCGTGGTCCAAACTTTCCTCTCTAG 1599 0.4371 MASEFGANGPSTPPSNSAESFIGCFISLISKCEIRYEGVLYLLNVQDSTIGLKNVKSYGTEGRRKDATQVPPSDKVYEYILFRGSDIKNLQIKSPSTSSKSEEQVLSDPAIIQSQYSGSPGSPAASVGGRNLTESIQRQDTPEISSKPFPVGLPSYQSVTELGPSNSSAATKVASHPSFSSAMSWQGPSDLSSSGSHSLLQSSSLYSPPIAASVVVQNQIKNAEPQLPTKGGWTGFPERGLPISSATSSSLVNLTHSNSLTSLKNSDSLDVPSLLIPVPYSASMAFDGSNMPQFSSPYQDICPDPRAIHPRHSAPSFVDSTSGLLPTTPSLLTPDQFANPREQLLSTTHNLNPNQKGMGSLTQTSFGSSALMPFPASQAPLLPLPTSVQKPQYTAPQFTEEFDFEAMNEKFRKDEVWGSLGNATTIEGVQDNTSLNLGNREYHGMVPNHKSAYKKDDFFDTISCNSLTRGSRNGQNRFSERMKQDTETFGNFQQRHNFSYGAGRGENFRGSYNWGGRGYGYGGRGRGPNFPL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01654 532 MobiDBLite consensus disorder prediction 158 172 - -
Viun2g01654 532 Pfam Scd6-like Sm domain 21 94 IPR025609 -
Viun2g01654 532 SMART LSM14_2 15 116 IPR025609 -
Viun2g01654 532 ProSiteProfiles FFD box profile. 451 466 IPR025761 -
Viun2g01654 532 ProSiteProfiles DFDF domain profile. 390 426 IPR025762 -
Viun2g01654 532 Pfam FDF domain 397 491 IPR019050 -
Viun2g01654 532 ProSiteProfiles TFG box profile. 473 493 IPR025768 -
Viun2g01654 532 Gene3D - 13 97 - -
Viun2g01654 532 MobiDBLite consensus disorder prediction 137 172 - -
Viun2g01654 532 PANTHER SCD6 PROTEIN-RELATED 16 527 - -
Viun2g01654 532 CDD LSm14_N 18 92 IPR025609 -
Viun2g01654 532 SMART FDF_2 396 493 IPR019050 -
Viun2g01654 532 SUPERFAMILY Sm-like ribonucleoproteins 20 95 IPR010920 -
Viun2g01654 532 ProSiteProfiles Sm domain profile. 13 96 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01654 Viun-Chr2 26169950 26176272 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01654 K18749 - gmx:102669894 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01654 2 26169950 26176272 Viun2g01654 2 26169950 26176272 ECH